ncRNA ID | novel_zma_miR2545 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:85735554-85735669 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089713 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGGGGGCAGGGGUGCACGCUGCGC - 24 |
Stem-loop(if miRNA) |
--    G -   G    G      G A    GGUC     C  C    A G   G  G   U   GUAG G GCG CUCC GUCUCC G CGCC    GCGCG AC GCGC G GAC GC GUC C   |||| | ||| |||| |||||| | ||||    ||||| || |||| | ||| || |||   CGUC C CGU GGGG CGGGGG C GUGG    CGUGC UG CGUG C CUG CG CAG C CG    G A   -    A      A -    ---A     -  A    - G   G  G   G |
Stem-loop sequence | GUAGGGGCGGCUCCGGUCUCCGGACGCCGGUCGCGCGCACCGCGCAGGGACGGCGGUCUCCGGACGGCGGUCGCGUGCAGUCGUGCAGGUGCAGGGGGCAGGGGUGCACGCUGCGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU941187.1 |
|
3.0 | Zea mays clone 1376489 mRNA sequence | NA | coding protein | psRNATarget |