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BaseInfo

ncRNA ID	novel_zma_miR2543
Species	Zea mays
Class	miRNA
Genome position	Chr5:141789244-141789343 [+]
Reference genome	RefGen_v4
Source	SRR1583944
Length	22
Mature sequence(if miRNA)	79 - GGUUUUAUACCCUCAGAGGUAC - 100
Stem-loop(if miRNA)	-AC    A    -       G    GGA   ----AU    UG A    U   A    CCUU GAGG UAUGAAG CAUA   CAU      GUAU  C UUCA AUG A    |||| |||| ||||||| ||||   |||      ||||  | |||| |||    GGAG CUCC AUAUUUU GUGU   GUA      UAUA  G AAGU UAC U CAU    A    C       G    --A   GACGUU    GU -    -   U
Stem-loop sequence	ACCCUUAGAGGUAUGAAGGCAUAGGACAUAUGUAUUGCAUUCAUAUGAAUUCAUUGAAGUGAUAUUUGCAGAUGAUGUGGUUUUAUACCCUCAGAGGUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT067987.2	ncRNA:22   CAUGGAGACUCCCAUAUUUUGG   1   *||||||||||||||||||||| targets:532   AUACCUCUGAGGGUAUAAAACC   553 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0014C08 mRNA, complete cds	NA	coding protein	psRNATarget
BT084267.2	ncRNA:22   CAUGGAGACUCCCAUAUUUUGG   1   *||||||||||||||||||||| targets:639   AUACCUCUGAGGGUAUAAAACC   660 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0095N09 mRNA, complete cds	NA	coding protein	psRNATarget
BT060521.1	ncRNA:22   CAUGGAGACUCCCAUAUUUUGG   1   *||||||||=|||||||||||| targets:1045   AUACCUCUGGGGGUAUAAAACC   1066 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0011I15 mRNA, complete cds	NA	coding protein	psRNATarget
BT069061.2	ncRNA:22   CAUGGAGACUCCCAUAUUUUGG   1   *|||||||*||*|||||||||| targets:453   AUACCUCUUAGAGUAUAAAACC   474 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0152G15 mRNA, complete cds	NA	coding protein	psRNATarget