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BaseInfo

ncRNA ID	novel_zma_miR2541
Species	Zea mays
Class	miRNA
Genome position	Chr2:107031732-107031785 [-]
Reference genome	RefGen_v4
Source	SRR2089713
Length	24
Mature sequence(if miRNA)	31 - CCCUAGGGCGCGGACUGUCCGGCU - 54
Stem-loop(if miRNA)	--         G     U     -   C   CCCUAGGGC CGGAC GUCCG GCU U   ||||||||| ||||| ||||| |||   GGGAUCCCG GCCUG CAGGC CGG A AC         -     U     G   G
Stem-loop sequence	CCCUAGGGCGCGGACUGUCCGGCUCUAGGGCGCGGACUGUCCGGCCCUAGGGCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ049111.1	ncRNA:24   UCGGCCUGUCAGGCGCGGGAUCCC   1   =|||||||=|||||||||||=||| targets:73   GGCCGGACGGUCCGCGCCCUGGGG   96 Target Full Sequence	2.5	TSA: Zea mays contig50229, mRNA sequence	NA	coding protein	psRNATarget
EU968855.1	ncRNA:24   UCGGCCUGUCAGGCGCGGGAUCCC   1   =|||||||=||||||||=|||||| targets:770   GGCCGGACGGUCCGCGCUCUAGGG   793 Target Full Sequence	2.5	Zea mays clone 324570 mRNA sequence	NA	coding protein	psRNATarget
EU970066.1	ncRNA:24   UCGGCCUGUCAGGCGCGGGAUCCC   1   =|||||||=|||||||||||=||| targets:977   GGCCGGACGGUCCGCGCCCUGGGG   1000 Target Full Sequence	2.5	Zea mays clone 339328 mRNA sequence	NA	coding protein	psRNATarget
BT061906.1	ncRNA:24   UCGGCCUGUCAGGCGCGGGAUCCC   1   =*||||||=|||||||||||=||| targets:262   GUCCGGACGGUCCGCGCCCUGGGG   285 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0196M13 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008679602.2	ncRNA:24   UCGGCCUGUCAGGCGCGGGAUCCC   1   *|*=||||||*|||*||||||||| targets:2062   UGGUGGACAGCCCGAGCCCUAGGG   2085 Target Full Sequence	2.5	PREDICTED: Zea mays scarecrow-like protein 34 (LOC103652667), mRNA	NA	coding protein	psRNATarget