Search result

BaseInfo

ncRNA ID osa-miR171g
Species Oryza sativa
Class miRNA
Genome position Chr7:15636744-15636832 [-]
Reference genome MSU7
Source miRBase
Length 21
Mature sequence(if miRNA) 11 - GAGGUGAGCCGAGCCAAUAUC - 31
Stem-loop(if miRNA)        CA        A             AGCAA    AAA   C
GACAUGG  UGGUAUUG CUUGGCUCAUCUC     CAGC   CUG A
|||||||  |||||||| |||||||||||||     ||||   |||
CUGUACU  ACUAUAAC GAGCCGAGUGGAG     GUCG   GAC U
       UC        C             -----    --C   G
Stem-loop sequence GACAUGGCAUGGUAUUGACUUGGCUCAUCUCAGCAACAGCAAACUGCAUGCAGCGCUGGAGGUGAGCCGAGCCAAUAUCACUUCAUGUC

Reference

1 PMID:15200956
"Computational identification of plant microRNAs and their targets, including a stress-induced miRNA";
Jones-Rhoades MW, Bartel DP;
Mol Cell. 14:787-799(2004).