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BaseInfo

ncRNA ID novel_zma_miR2530
Species Zea mays
Class miRNA
Genome position Chr2:149395563-149395656 [+]
Reference genome RefGen_v4
Source SRR2089712
Length 24
Mature sequence(if miRNA) 71 - UGUAAUGUCUCUGGCACUCGGCAA - 94
Stem-loop(if miRNA) --       U      C   A       A         AAGAC    
  GCCGAGU UCAGGG CAU ACACUCG CAAAGAACC     CUGGG
  ||||||| |||||| ||| ||||||| |||||||||     ||||C
  CGGCUCA GGUCUC GUA UGUGAGC GUUUCUUGG     GGCCA
AA       C      U   A       C         -AUAC    
Stem-loop sequence GCCGAGUUUCAGGGCCAUAACACUCGACAAAGAACCAAGACCUGGGCACCGGCAUAGGUUCUUUGCCGAGUGUAAUGUCUCUGGCACUCGGCAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ238769.1
ncRNA:24   AACGGCUCACGGUCUCUGUAAUGU   1
  |||||||||||||*||||||||||
targets:173   UUGCCGAGUGCCAUAGACAUUACA   196

1.5 Sequence 4764 from Patent EP2985353 NA coding protein psRNATarget
JB167100.1
ncRNA:24   AACGGCUCACGGUCUCUGUAAUGU   1
  |||||||||||||*||||||||||
targets:173   UUGCCGAGUGCCAUAGACAUUACA   196

1.5 Sequence 4764 from Patent EP2559767 NA coding protein psRNATarget
HI406639.1
ncRNA:24   AACGGCUCACGGUCUCUGUAAUGU   1
  |||||||||||||*||||||||||
targets:173   UUGCCGAGUGCCAUAGACAUUACA   196

1.5 Sequence 4764 from Patent EP2074227 NA coding protein psRNATarget