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BaseInfo

ncRNA ID osa-miR398b
Species Oryza sativa
Class miRNA
Genome position Chr7:14598617-14598704 [-]
Reference genome MSU7
Source miRBase
Length 21
Mature sequence(if miRNA) 11 - UGUGUUCUCAGGUCGCCCCUG - 31
Stem-loop(if miRNA)         UA         G              -U   G  G
GGAGUUCC  CAGGGGCGA CUGGGAACACACGG  GAU AG C
||||||||  ||||||||| ||||||||||||||  ||| || G
UCUCAGGG  GUCCCCGCU GACUCUUGUGUGCU  CUG UC G
        CC         G              UU   G  U
Stem-loop sequence GGAGUUCCUACAGGGGCGAGCUGGGAACACACGGUGAUGAGGCGGUCUGGUCUUUCGUGUGUUCUCAGGUCGCCCCUGCCGGGACUCU

Reference

1 PMID:15200956
"Computational identification of plant microRNAs and their targets, including a stress-induced miRNA";
Jones-Rhoades MW, Bartel DP;
Mol Cell. 14:787-799(2004).