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BaseInfo

ncRNA ID	novel_zma_miR2521
Species	Zea mays
Class	miRNA
Genome position	Chr5:12264163-12264257 [+]
Reference genome	RefGen_v4
Source	SRR1583944;SRR2647391
Length	23
Mature sequence(if miRNA)	1 - GAACACUAAUUUCCUAUGGGAUU - 23
Stem-loop(if miRNA)	--            C                             UUA   GAACACUAAUUU CUAUGGGAUUUUCAUUUUCCCAAGGGAAA   G   |||||||||||| |||||||||||||||||||||||||||||   U   CUUGUGAUUAAA GGUACCUUAAAAGUAAAAGGGUUCCCUUU   U CC            A                             UAC
Stem-loop sequence	GAACACUAAUUUCCUAUGGGAUUUUCAUUUUCCCAAGGGAAAUUAGUUCAUUUUCCCUUGGGAAAAUGAAAAUUCCAUGGAAAAUUAGUGUUCCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020544943.1	ncRNA:23   UUAGGGUAUCCUUUAAUCACAAG   1   ||||||||=|||||||||||||| targets:1459   AAUCCCAUGGGAAAUUAGUGUUC   1481 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC100273625 (IDP475), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_020544942.1	ncRNA:23   UUAGGGUAUCCUUUAAUCACAAG   1   ||||||||=|||||||||||||| targets:1502   AAUCCCAUGGGAAAUUAGUGUUC   1524 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC100273625 (IDP475), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020544940.1	ncRNA:23   UUAGGGUAUCCUUUAAUCACAAG   1   ||||||||=|||||||||||||| targets:1503   AAUCCCAUGGGAAAUUAGUGUUC   1525 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC100273625 (IDP475), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020544939.1	ncRNA:23   UUAGGGUAUCCUUUAAUCACAAG   1   ||||||||=|||||||||||||| targets:1546   AAUCCCAUGGGAAAUUAGUGUUC   1568 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC100273625 (IDP475), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020544941.1	ncRNA:23   UUAGGGUAUCCUUUAAUCACAAG   1   ||||||||=|||||||||||||| targets:1632   AAUCCCAUGGGAAAUUAGUGUUC   1654 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC100273625 (IDP475), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008675357.2	ncRNA:23   UUAGGGUAUCCUUUAAUCACAAG   1   |||||=||=|||||||||||||| targets:193   AAUCCUAUGGGAAAUUAGUGUUC   215 Target Full Sequence	2.0	PREDICTED: Zea mays UNE1 (LOC103649618), mRNA	NA	coding protein	psRNATarget