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BaseInfo

ncRNA ID	novel_zma_miR2516
Species	Zea mays
Class	miRNA
Genome position	Chr10:31387921-31388015 [+]
Reference genome	RefGen_v4
Source	SRR1583944
Length	24
Mature sequence(if miRNA)	72 - AUCCCUCUCAAUUCAUAUGGAUUG - 95
Stem-loop(if miRNA)	--              GA         UAUGGAUUA  GCG       -   A   AUCCAUAUGGAUUG  GGGGAUUGA         AG   AUUUUGA CUU C   ||||||||||||||  |||||||||         ||   ||||||| |||   UAGGUAUACUUAAC  UCCCUAACU         UC   UAAAAUU GGG U GU              UC         --------C  --A       A   A
Stem-loop sequence	AUCCAUAUGGAUUGGAGGGGAUUGAUAUGGAUUAAGGCGAUUUUGACUUACUAGGGAUUAAAAUACUCUCAAUCCCUCUCAAUUCAUAUGGAUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001147345.1	ncRNA:24   GUUAGGUAUACUUAACUCUCCCUA   1   ||||||||||||||||||*||||| targets:1662   CAAUCCAUAUGAAUUGAGUGGGAU   1685 Target Full Sequence	1.5	Zea mays uncharacterized LOC100272892 (LOC100272892), mRNA	NA	coding protein	psRNATarget
BT039694.1	ncRNA:24   GUUAGGUAUACUUAACUCUCCCUA   1   ||||||||||||||||||*||||| targets:1662   CAAUCCAUAUGAAUUGAGUGGGAU   1685 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0039F21 mRNA, complete cds	NA	coding protein	psRNATarget
BT062929.1	ncRNA:24   GUUAGGUAUACUUAACUCUCCCUA   1   ||||||||||||||||||*||||| targets:1561   CAAUCCAUAUGAAUUGAGUGGGAU   1584 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0008K15 mRNA, complete cds	NA	coding protein	psRNATarget
EU956028.1	ncRNA:24   GUUAGGUAUACUUAACUCUCCCUA   1   ||||||||||||||||||*||||| targets:1472   CAAUCCAUAUGAAUUGAGUGGGAU   1495 Target Full Sequence	1.5	Zea mays clone 1555850 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_020548575.1	ncRNA:24   GUUAGGUAUACUUAACUCUCCCUA   1   ||*|=|||=||=|||||||||||| targets:2661   CAUUUCAUGUGGAUUGAGAGGGAU   2684 Target Full Sequence	2.5	PREDICTED: Zea mays cysteine-rich receptor-like protein kinase 19 (LOC103647728), mRNA	NA	coding protein	psRNATarget