ncRNA ID | novel_zma_miR2508 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:101153543-101153614 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583944 |
Length | 24 |
Mature sequence(if miRNA) | 49 - CAAUCCCCUCUAAUCCUACCGGGA - 72 |
Stem-loop(if miRNA) |
--    G     C A                   UA   CCGG AGGAU G AGGGGAUUGAGGGGGAAAU  G   |||| ||||| | |||||||||||||||||||   GGCC UCCUA U UCCCCUAACUCCCCCUUUA  U AG    A     A C                   CU |
Stem-loop sequence | CCGGGAGGAUCGAAGGGGAUUGAGGGGGAAAUUAGUUCAUUUCCCCCUCAAUCCCCUCUAAUCCUACCGGGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ106816.1 |
|
2.5 | TSA: Zea mays contig42474, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_008649581.2 |
|
2.5 | PREDICTED: Zea mays pentatricopeptide repeat protein (LOC100527940), transcript variant X1, mRNA | NA | coding protein | psRNATarget |