Search result

BaseInfo

ncRNA ID	novel_zma_miR2495
Species	Zea mays
Class	miRNA
Genome position	Chr1:237842653-237842779 [-]
Reference genome	RefGen_v4
Source	SRR2089712;SRR2089714;SRR3341905
Length	21
Mature sequence(if miRNA)	107 - UUUUGUUAAUGUUUGGAGUAG - 127
Stem-loop(if miRNA)	--                      G          UU  AAUUCUG    AA     GU  CCUGGUG   UUUUGUUAAUGUUUGGAGUAGC CCAUCAAAGG  UA       CAGU  UCCUG  AG       G   |||||||||||||||||||||| ||||||||||  ||       ||||  |||||  ||       C   AAAACAAUUACAAACCUCAUCG GGUAGUUUCU  GU       GUCA  AGGGC  AC       U UU                      G          GU  ------G    --     --  AAAGGUU
Stem-loop sequence	UUUUGUUAAUGUUUGGAGUAGCGCCAUCAAAGGUUUAAAUUCUGCAGUAAUCCUGGUAGCCUGGUGGCUUUGGAAACACGGGAACUGGUGUGUCUUUGAUGGGGCUACUCCAAACAUUAACAAAAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ089975.1	ncRNA:21   GAUGAGGUUUGUAAUUGUUUU   1   ||*|*|||||||||||||||| targets:25   CUUCACCAAACAUUAACAAAA   45 Target Full Sequence	2.0	TSA: Zea mays contig25621, mRNA sequence	NA	coding protein	psRNATarget
BT084216.1	ncRNA:21   GAUGAGGUUUGUAAUUGUUUU   1   **|*||||||||||||||||| targets:1075   AAAAUCCAAACAUUAACAAAA   1095 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0090D11 mRNA, complete cds	NA	coding protein	psRNATarget