ncRNA ID | osa-miR5518 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr7:9526304-9526466 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 133 - AUACUCAAACAGGGCAUUGCA - 153 |
Stem-loop(if miRNA) |
A     --- G  A   - AGUCCCGAUUCCUGCUUACUGCAUGCCUUAUUUGGAUGUGCCCAAAUUCAGACCGGGUCACAUAU  AUCAA   G AG GAA U                                                                 A  |||||   | || ||| |  UAGUU   U GA CGU A                                                                 U -     ACU -  -   U CGGGACAAACUCAUACGUUUCUUAGCACUAAUACAAACCGGGAUCUAAAAUGUAAUUUUACGUGG |
Stem-loop sequence | AAUCAAGGAGAGAAUAGUCCCGAUUCCUGCUUACUGCAUGCCUUAUUUGGAUGUGCCCAAAUUCAGACCGGGUCACAUAUAUGGUGCAUUUUAAUGUAAAAUCUAGGGCCAAACAUAAUCACGAUUCUUUGCAUACUCAAACAGGGCAUUGCAGUUCAUUGAU |
1 | PMID:21679406
"Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa"; Wei LQ, Yan LF, Wang T; Genome Biol. 12:R53(2011). |