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BaseInfo

ncRNA ID osa-miR5518
Species Oryza sativa
Class miRNA
Genome position Chr7:9526304-9526466 [+]
Reference genome MSU7
Source miRBase
Length 21
Mature sequence(if miRNA) 133 - AUACUCAAACAGGGCAUUGCA - 153
Stem-loop(if miRNA) A     --- G  A   - AGUCCCGAUUCCUGCUUACUGCAUGCCUUAUUUGGAUGUGCCCAAAUUCAGACCGGGUCACAUAU
 AUCAA   G AG GAA U                                                                 A
 |||||   | || ||| |
 UAGUU   U GA CGU A                                                                 U
-     ACU -  -   U CGGGACAAACUCAUACGUUUCUUAGCACUAAUACAAACCGGGAUCUAAAAUGUAAUUUUACGUGG
Stem-loop sequence AAUCAAGGAGAGAAUAGUCCCGAUUCCUGCUUACUGCAUGCCUUAUUUGGAUGUGCCCAAAUUCAGACCGGGUCACAUAUAUGGUGCAUUUUAAUGUAAAAUCUAGGGCCAAACAUAAUCACGAUUCUUUGCAUACUCAAACAGGGCAUUGCAGUUCAUUGAU

Reference

1 PMID:21679406
"Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa";
Wei LQ, Yan LF, Wang T;
Genome Biol. 12:R53(2011).