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BaseInfo

ncRNA ID novel_zma_miR2487
Species Zea mays
Class miRNA
Genome position Chr1:30211790-30211851 [+]
Reference genome RefGen_v4
Source SRR2089712
Length 23
Mature sequence(if miRNA) 1 - UUCUUUUUAGUUGUCACUGGAUA - 23
Stem-loop(if miRNA) --               A         U  A
  UUCUUUUUAGUUGUC CUGGAUAGU CA U
  ||||||||||||||| ||||||||| ||
  AAGAAAAAUCAACAG GACUUAUCA GU U
CA               C         C  U
Stem-loop sequence UUCUUUUUAGUUGUCACUGGAUAGUUCAAUUUUGCACUAUUCAGCGACAACUAAAAAGAAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020551485.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||||||
targets:2577   UAUCCAGCGACAACUAAAAAGAA   2599

1.0 PREDICTED: Zea mays putative cytochrome P450 superfamily protein (LOC100279319), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008674191.2
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||||||
targets:1200   UAUCCAGCGACAACUAAAAAGAA   1222

1.0 PREDICTED: Zea mays putative protein S-acyltransferase 16 (LOC100273154), transcript variant X1, mRNA NA coding protein psRNATarget
EU964807.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||||||
targets:1564   UAUCCAGCGACAACUAAAAAGAA   1586

1.0 Zea mays clone 281665 acetylornithine deacetylase mRNA, complete cds NA coding protein psRNATarget
NM_001156357.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||||||
targets:1564   UAUCCAGCGACAACUAAAAAGAA   1586

1.0 Zea mays Acetylornithine deacetylase (pco121857a), mRNA NA coding protein psRNATarget
EU971616.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||||||
targets:1211   UAUCCAGCGACAACUAAAAAGAA   1233

1.0 Zea mays clone 368130 rieske domain containing protein mRNA, complete cds NA coding protein psRNATarget
BT062468.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||||||
targets:620   UAUCCAGCGACAACUAAAAAGAA   642

1.0 Zea mays full-length cDNA clone ZM_BFb0302A02 mRNA, complete cds NA coding protein psRNATarget
EZ089411.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||||||
targets:356   UAUCCAGCGACAACUAAAAAGAA   378

1.0 TSA: Zea mays contig25057, mRNA sequence NA coding protein psRNATarget
LQ241364.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||||||
targets:52   UAUCCAGCGACAACUAAAAAGAA   74

1.0 Sequence 7359 from Patent EP2985353 NA coding protein psRNATarget
HI409234.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||||||
targets:52   UAUCCAGCGACAACUAAAAAGAA   74

1.0 Sequence 7359 from Patent EP2074227 NA coding protein psRNATarget
JB169695.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||||||
targets:52   UAUCCAGCGACAACUAAAAAGAA   74

1.0 Sequence 7359 from Patent EP2559767 NA coding protein psRNATarget
JB170012.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||||||
targets:45   UAUCCAGCGACAACUAAAAAGAA   67

1.0 Sequence 7676 from Patent EP2559767 NA coding protein psRNATarget
LQ241681.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||||||
targets:45   UAUCCAGCGACAACUAAAAAGAA   67

1.0 Sequence 7676 from Patent EP2985353 NA coding protein psRNATarget
HI409551.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||||||
targets:45   UAUCCAGCGACAACUAAAAAGAA   67

1.0 Sequence 7676 from Patent EP2074227 NA coding protein psRNATarget
HI403072.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||||||
targets:42   UAUCCAGCGACAACUAAAAAGAA   64

1.0 Sequence 1197 from Patent EP2074227 NA coding protein psRNATarget
JB163533.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||||||
targets:42   UAUCCAGCGACAACUAAAAAGAA   64

1.0 Sequence 1197 from Patent EP2559767 NA coding protein psRNATarget
LQ235202.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||||||
targets:42   UAUCCAGCGACAACUAAAAAGAA   64

1.0 Sequence 1197 from Patent EP2985353 NA coding protein psRNATarget
XM_008656230.2
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||||||||||||
targets:36   UAUUCAGCGACAACUAAAAAGAA   58

1.0 PREDICTED: Zea mays phosphatidylinositol transfer protein 2 (LOC103634487), mRNA NA coding protein psRNATarget
HI407230.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||||||||||||
targets:55   UAUUCAGCGACAACUAAAAAGAA   77

1.0 Sequence 5355 from Patent EP2074227 NA coding protein psRNATarget
JB167691.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||||||||||||
targets:55   UAUUCAGCGACAACUAAAAAGAA   77

1.0 Sequence 5355 from Patent EP2559767 NA coding protein psRNATarget
LQ239360.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||||||||||||
targets:55   UAUUCAGCGACAACUAAAAAGAA   77

1.0 Sequence 5355 from Patent EP2985353 NA coding protein psRNATarget
HI407324.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  *||||||*|||||||||||||||
targets:55   CAUCCAGCGACAACUAAAAAGAA   77

1.0 Sequence 5449 from Patent EP2074227 NA coding protein psRNATarget
LQ239454.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  *||||||*|||||||||||||||
targets:55   CAUCCAGCGACAACUAAAAAGAA   77

1.0 Sequence 5449 from Patent EP2985353 NA coding protein psRNATarget
JB167785.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  *||||||*|||||||||||||||
targets:55   CAUCCAGCGACAACUAAAAAGAA   77

1.0 Sequence 5449 from Patent EP2559767 NA coding protein psRNATarget
LQ241813.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*||=||||||||||||
targets:45   UAUUCAGCGAUAACUAAAAAGAA   67

2.5 Sequence 7808 from Patent EP2985353 NA coding protein psRNATarget
HI409683.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*||=||||||||||||
targets:45   UAUUCAGCGAUAACUAAAAAGAA   67

2.5 Sequence 7808 from Patent EP2074227 NA coding protein psRNATarget
JB170144.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*||=||||||||||||
targets:45   UAUUCAGCGAUAACUAAAAAGAA   67

2.5 Sequence 7808 from Patent EP2559767 NA coding protein psRNATarget
XM_020546693.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:2206   UAUCCAGCGACAACUAAAACGAA   2228

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X11, mRNA NA coding protein psRNATarget
XM_020546692.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:2268   UAUCCAGCGACAACUAAAACGAA   2290

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X10, mRNA NA coding protein psRNATarget
XM_020547478.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:3230   UAUCCAGCGACAACUAAAACGAA   3252

2.5 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020547479.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:3230   UAUCCAGCGACAACUAAAACGAA   3252

2.5 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546684.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:2307   UAUCCAGCGACAACUAAAACGAA   2329

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546683.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:2282   UAUCCAGCGACAACUAAAACGAA   2304

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546689.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:2227   UAUCCAGCGACAACUAAAACGAA   2249

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020546691.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:2268   UAUCCAGCGACAACUAAAACGAA   2290

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X9, mRNA NA coding protein psRNATarget
XM_020546686.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:2289   UAUCCAGCGACAACUAAAACGAA   2311

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020546687.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:2289   UAUCCAGCGACAACUAAAACGAA   2311

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X5, mRNA NA coding protein psRNATarget
XM_020546685.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:2289   UAUCCAGCGACAACUAAAACGAA   2311

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546694.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:2268   UAUCCAGCGACAACUAAAACGAA   2290

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X12, mRNA NA coding protein psRNATarget
XM_008666445.2
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:2268   UAUCCAGCGACAACUAAAACGAA   2290

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X14, mRNA NA coding protein psRNATarget
XM_020546613.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:3747   UAUCCAGCGACAAAUAAAAAGAA   3769

2.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546695.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:2268   UAUCCAGCGACAACUAAAACGAA   2290

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X13, mRNA NA coding protein psRNATarget
XM_008669138.2
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:2852   UAUCCAGCGACAACUAAAACGAA   2874

2.5 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008669142.2
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:2720   UAUCCAGCGACAACUAAAACGAA   2742

2.5 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X8, mRNA NA coding protein psRNATarget
XM_008669143.2
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:2790   UAUCCAGCGACAACUAAAACGAA   2812

2.5 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020546612.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:2968   UAUCCAGCGACAAAUAAAAAGAA   2990

2.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546614.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:2862   UAUCCAGCGACAAAUAAAAAGAA   2884

2.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546615.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:2845   UAUCCAGCGACAAAUAAAAAGAA   2867

2.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020537567.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:1501   UAUCCAGCGACAACUAAAACGAA   1523

2.5 PREDICTED: Zea mays MADS2 (zmm2), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008651543.2
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:2545   UAUCCAGCGACAAAUAAAAAGAA   2567

2.5 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X1, mRNA NA coding protein psRNATarget
EU971439.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||**||||||||||||||
targets:2162   UAUCCAGCUACAACUAAAAAGAA   2184

2.0 Zea mays clone 364738 cyclin-like F-box mRNA, complete cds NA coding protein psRNATarget
NM_001158152.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||**||||||||||||||
targets:2162   UAUCCAGCUACAACUAAAAAGAA   2184

2.0 Zea mays cyclin-like F-box (LOC100285258), mRNA NA coding protein psRNATarget
XM_008677351.2
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:2106   UAUCCAGCGACAACUAAAACGAA   2128

2.5 PREDICTED: Zea mays hypothetical protein (LOC103651662), mRNA NA coding protein psRNATarget
EU957018.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:2049   UAUCCAGCGACAAAUAAAAAGAA   2071

2.5 Zea mays clone 1580670 cytochrome P450 CYP84A33v2 mRNA, complete cds NA coding protein psRNATarget
NM_001148943.2
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:1592   UAUCCAGCGACAAAUAAAAAGAA   1614

2.5 Zea mays uncharacterized LOC100274590 (LOC100274590), mRNA NA coding protein psRNATarget
XM_008645651.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*||||||||||||*||
targets:1694   UAUCCAGCGACAACUAAAAAUAA   1716

2.5 PREDICTED: Zea mays CAAX prenyl protease 1 (LOC100286144), transcript variant X1, mRNA NA coding protein psRNATarget
NM_001159032.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*||||||||||||*||
targets:1669   UAUCCAGCGACAACUAAAAAUAA   1691

2.5 Zea mays CAAX prenyl protease 1 (LOC100286144), mRNA NA coding protein psRNATarget
EU975832.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*||||||||||||*||
targets:1669   UAUCCAGCGACAACUAAAAAUAA   1691

2.5 Zea mays clone 502363 CAAX prenyl protease 1 mRNA, complete cds NA coding protein psRNATarget
XM_008677073.2
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:1576   UAUCCAGCGACAAAUAAAAAGAA   1598

2.5 PREDICTED: Zea mays probable glycosyltransferase At5g03795 (LOC103651446), mRNA NA coding protein psRNATarget
BT065586.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*||||||||||||*||
targets:1659   UAUCCAGCGACAACUAAAAAUAA   1681

2.5 Zea mays full-length cDNA clone ZM_BFb0315O03 mRNA, complete cds NA coding protein psRNATarget
XM_008671992.2
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:1321   UAUCCAGCGACAAAUAAAAAGAA   1343

2.5 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008651544.2
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:1404   UAUCCAGCGACAAAUAAAAAGAA   1426

2.5 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X2, mRNA NA coding protein psRNATarget
BT067066.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:468   UAUCCAGCGACAACUAAAACGAA   490

2.5 Zea mays full-length cDNA clone ZM_BFb0180L06 mRNA, complete cds NA coding protein psRNATarget
XM_008647346.2
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:190   UAUCCAGCGACAAAUAAAAAGAA   212

2.5 PREDICTED: Zea mays E3 ubiquitin-protein ligase Os03g0188200 (LOC103626988), mRNA NA coding protein psRNATarget
EU965844.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:1337   UAUCCAGCGACAAAUAAAAAGAA   1359

2.5 Zea mays clone 289333 wax synthase isoform 3 mRNA, complete cds NA coding protein psRNATarget
NM_001156655.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:1337   UAUCCAGCGACAAAUAAAAAGAA   1359

2.5 Zea mays wax synthase (LOC100283756), mRNA NA coding protein psRNATarget
XM_008671993.2
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:1215   UAUCCAGCGACAAAUAAAAAGAA   1237

2.5 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008655254.2
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:1097   UAUCCAGCGACAACUAAAACGAA   1119

2.5 PREDICTED: Zea mays acid phosphatase 1 (LOC103633566), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020541157.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:1078   UAUCCAGCGACAACUAAAACGAA   1100

2.5 PREDICTED: Zea mays acid phosphatase 1 (LOC103633566), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020541158.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:1076   UAUCCAGCGACAACUAAAACGAA   1098

2.5 PREDICTED: Zea mays acid phosphatase 1 (LOC103633566), transcript variant X3, mRNA NA coding protein psRNATarget
BT065083.2
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:255   UAUCCAGCGACAACUAAAACGAA   277

2.5 Zea mays full-length cDNA clone ZM_BFb0081B22 mRNA, complete cds NA coding protein psRNATarget
BT036723.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:745   UAUCCAGCGACAACUAAAACGAA   767

2.5 Zea mays full-length cDNA clone ZM_BFb0133L19 mRNA, complete cds NA coding protein psRNATarget
BT060817.2
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:279   UAUCCAGCGACAAAUAAAAAGAA   301

2.5 Zea mays full-length cDNA clone ZM_BFb0054B23 mRNA, complete cds NA coding protein psRNATarget
NM_001153043.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  ||||*||*|||||||||||||||
targets:884   UAUCGAGCGACAACUAAAAAGAA   906

2.0 Zea mays uncharacterized LOC100280105 (LOC100280105), mRNA NA coding protein psRNATarget
BT055583.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  ||||*||*|||||||||||||||
targets:884   UAUCGAGCGACAACUAAAAAGAA   906

2.0 Zea mays full-length cDNA clone ZM_BFc0049P16 mRNA, complete cds NA coding protein psRNATarget
EU944684.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:750   UAUCCAGCGACAACUAAAACGAA   772

2.5 Zea mays clone 226132 mRNA sequence NA coding protein psRNATarget
EU952378.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:762   UAUCCAGCGACAACUAAAACGAA   784

2.5 Zea mays clone 1278936 mitochondrial import inner membrane translocase subunit TIM14 mRNA, complete cds; nuclear gene for mitochondrial product NA coding protein psRNATarget
EZ112557.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:97   UAUCCAGCGACAACUAAAACGAA   119

2.5 TSA: Zea mays contig48218, mRNA sequence NA coding protein psRNATarget
EZ061437.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:217   UAUCCAGCGACAAAUAAAAAGAA   239

2.5 TSA: Zea mays contig62559, mRNA sequence NA coding protein psRNATarget
LQ235409.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:60   UAUCCAGCGACAAAUAAAAAGAA   82

2.5 Sequence 1404 from Patent EP2985353 NA coding protein psRNATarget
LQ235531.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:60   UAUCCAGCGACAAAUAAAAAGAA   82

2.5 Sequence 1526 from Patent EP2985353 NA coding protein psRNATarget
HI403279.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:60   UAUCCAGCGACAAAUAAAAAGAA   82

2.5 Sequence 1404 from Patent EP2074227 NA coding protein psRNATarget
HI403401.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:60   UAUCCAGCGACAAAUAAAAAGAA   82

2.5 Sequence 1526 from Patent EP2074227 NA coding protein psRNATarget
JB163862.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:60   UAUCCAGCGACAAAUAAAAAGAA   82

2.5 Sequence 1526 from Patent EP2559767 NA coding protein psRNATarget
JB163740.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:60   UAUCCAGCGACAAAUAAAAAGAA   82

2.5 Sequence 1404 from Patent EP2559767 NA coding protein psRNATarget
LQ242145.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:53   UAUCCAGCGACAAAUAAAAAGAA   75

2.5 Sequence 8140 from Patent EP2985353 NA coding protein psRNATarget
JB170476.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:53   UAUCCAGCGACAAAUAAAAAGAA   75

2.5 Sequence 8140 from Patent EP2559767 NA coding protein psRNATarget
LQ240748.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:53   UAUCCAGCGACAAAUAAAAAGAA   75

2.5 Sequence 6743 from Patent EP2985353 NA coding protein psRNATarget
HI408618.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:53   UAUCCAGCGACAAAUAAAAAGAA   75

2.5 Sequence 6743 from Patent EP2074227 NA coding protein psRNATarget
JB169079.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:53   UAUCCAGCGACAAAUAAAAAGAA   75

2.5 Sequence 6743 from Patent EP2559767 NA coding protein psRNATarget
HI408598.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:54   UAUCCAGCGACAACUAAAACGAA   76

2.5 Sequence 6723 from Patent EP2074227 NA coding protein psRNATarget
LQ241829.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:53   UAUCCAGCGACAAGUAAAAAGAA   75

2.5 Sequence 7824 from Patent EP2985353 NA coding protein psRNATarget
JB170160.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:53   UAUCCAGCGACAAGUAAAAAGAA   75

2.5 Sequence 7824 from Patent EP2559767 NA coding protein psRNATarget
HI410015.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:53   UAUCCAGCGACAAAUAAAAAGAA   75

2.5 Sequence 8140 from Patent EP2074227 NA coding protein psRNATarget
HI409699.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||*|||||||||
targets:53   UAUCCAGCGACAAGUAAAAAGAA   75

2.5 Sequence 7824 from Patent EP2074227 NA coding protein psRNATarget
LQ240728.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:54   UAUCCAGCGACAACUAAAACGAA   76

2.5 Sequence 6723 from Patent EP2985353 NA coding protein psRNATarget
JB169059.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:54   UAUCCAGCGACAACUAAAACGAA   76

2.5 Sequence 6723 from Patent EP2559767 NA coding protein psRNATarget
LQ238487.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  ||||||**|||||||||||||||
targets:47   UAUCCAACGACAACUAAAAAGAA   69

2.0 Sequence 4482 from Patent EP2985353 NA coding protein psRNATarget
JB166818.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  ||||||**|||||||||||||||
targets:47   UAUCCAACGACAACUAAAAAGAA   69

2.0 Sequence 4482 from Patent EP2559767 NA coding protein psRNATarget
HI406357.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  ||||||**|||||||||||||||
targets:47   UAUCCAACGACAACUAAAAAGAA   69

2.0 Sequence 4482 from Patent EP2074227 NA coding protein psRNATarget
JB166581.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|*|||||||||||||
targets:45   UAUCCAGCGCCAACUAAAAAGAA   67

2.0 Sequence 4245 from Patent EP2559767 NA coding protein psRNATarget
LQ238250.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|*|||||||||||||
targets:45   UAUCCAGCGCCAACUAAAAAGAA   67

2.0 Sequence 4245 from Patent EP2985353 NA coding protein psRNATarget
HI406120.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|*|||||||||||||
targets:45   UAUCCAGCGCCAACUAAAAAGAA   67

2.0 Sequence 4245 from Patent EP2074227 NA coding protein psRNATarget
HI403082.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:43   UAUCCAGCGACAACUAAAACGAA   65

2.5 Sequence 1207 from Patent EP2074227 NA coding protein psRNATarget
LQ235212.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:43   UAUCCAGCGACAACUAAAACGAA   65

2.5 Sequence 1207 from Patent EP2985353 NA coding protein psRNATarget
JB163543.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:43   UAUCCAGCGACAACUAAAACGAA   65

2.5 Sequence 1207 from Patent EP2559767 NA coding protein psRNATarget
LQ235218.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:42   UAUCCAGCGACAACUAAAACGAA   64

2.5 Sequence 1213 from Patent EP2985353 NA coding protein psRNATarget
HI403088.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:42   UAUCCAGCGACAACUAAAACGAA   64

2.5 Sequence 1213 from Patent EP2074227 NA coding protein psRNATarget
JB163549.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||||||*|||||||||||*|||
targets:42   UAUCCAGCGACAACUAAAACGAA   64

2.5 Sequence 1213 from Patent EP2559767 NA coding protein psRNATarget
XM_020553339.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||||||||*|||
targets:2191   UAUUCAGCGACAACUAAAAUGAA   2213

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X5, mRNA NA coding protein psRNATarget
XM_020553327.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||||||||*|||
targets:2160   UAUUCAGCGACAACUAAAAUGAA   2182

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020553342.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||||||||*|||
targets:2078   UAUUCAGCGACAACUAAAAUGAA   2100

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020553332.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||||||||*|||
targets:2047   UAUUCAGCGACAACUAAAAUGAA   2069

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X4, mRNA NA coding protein psRNATarget
XM_008682282.2
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||||||||*|||
targets:1458   UAUUCAGCGACAACUAAAAUGAA   1480

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X3, mRNA NA coding protein psRNATarget
EU973763.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||||||||*|||
targets:1352   UAUUCAGCGACAACUAAAAUGAA   1374

2.5 Zea mays clone 409560 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
NM_001158647.2
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||||||||*|||
targets:1350   UAUUCAGCGACAACUAAAAUGAA   1372

2.5 Zea mays F-box domain containing protein (LOC100285757), mRNA NA coding protein psRNATarget
XM_008682289.2
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||||||||*|||
targets:1298   UAUUCAGCGACAACUAAAAUGAA   1320

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X6, mRNA NA coding protein psRNATarget
EU973774.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||||||||*|||
targets:1284   UAUUCAGCGACAACUAAAAUGAA   1306

2.5 Zea mays clone 410704 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008682276.2
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||||||||*|||
targets:1269   UAUUCAGCGACAACUAAAAUGAA   1291

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X2, mRNA NA coding protein psRNATarget
EU953599.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||||||||*|||
targets:1274   UAUUCAGCGACAACUAAAAUGAA   1296

2.5 Zea mays clone 1437867 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
BT035546.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*||||*||||||||||
targets:961   UAUUCAGCGACAUCUAAAAAGAA   983

2.5 Zea mays full-length cDNA clone ZM_BFb0068P01 mRNA, complete cds NA coding protein psRNATarget
EU968044.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*||||*||||||||||
targets:1073   UAUUCAGCGACAUCUAAAAAGAA   1095

2.5 Zea mays clone 313382 adenylyl-sulfate kinase 1 mRNA, complete cds NA coding protein psRNATarget
BT062074.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||||||||*|||
targets:1186   UAUUCAGCGACAACUAAAAUGAA   1208

2.5 Zea mays full-length cDNA clone ZM_BFb0212O02 mRNA, complete cds NA coding protein psRNATarget
NM_001151882.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||*|||||||||
targets:618   UAUUCAGCGACAAAUAAAAAGAA   640

2.5 Zea mays uncharacterized LOC100278686 (LOC100278686), mRNA NA coding protein psRNATarget
EU974849.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||*|||||||||
targets:618   UAUUCAGCGACAAAUAAAAAGAA   640

2.5 Zea mays clone 459794 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
EU964901.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||*|||||||||
targets:546   UAUUCAGCGACAAAUAAAAAGAA   568

2.5 Zea mays clone 282450 mRNA sequence NA coding protein psRNATarget
JB167731.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||||||||*|||
targets:55   UAUUCAGCGACAACUAAAACGAA   77

2.5 Sequence 5395 from Patent EP2559767 NA coding protein psRNATarget
JB167766.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*||||*||||||||||
targets:55   UAUUCAGCGACAUCUAAAAAGAA   77

2.5 Sequence 5430 from Patent EP2559767 NA coding protein psRNATarget
HI407270.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||||||||*|||
targets:55   UAUUCAGCGACAACUAAAACGAA   77

2.5 Sequence 5395 from Patent EP2074227 NA coding protein psRNATarget
HI407305.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*||||*||||||||||
targets:55   UAUUCAGCGACAUCUAAAAAGAA   77

2.5 Sequence 5430 from Patent EP2074227 NA coding protein psRNATarget
LQ239400.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||||||||*|||
targets:55   UAUUCAGCGACAACUAAAACGAA   77

2.5 Sequence 5395 from Patent EP2985353 NA coding protein psRNATarget
LQ239435.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*||||*||||||||||
targets:55   UAUUCAGCGACAUCUAAAAAGAA   77

2.5 Sequence 5430 from Patent EP2985353 NA coding protein psRNATarget
HI407229.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||||||||*|||
targets:54   UAUUCAGCGACAACUAAAACGAA   76

2.5 Sequence 5354 from Patent EP2074227 NA coding protein psRNATarget
JB167690.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||||||||*|||
targets:54   UAUUCAGCGACAACUAAAACGAA   76

2.5 Sequence 5354 from Patent EP2559767 NA coding protein psRNATarget
LQ239359.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||||||||*|||
targets:54   UAUUCAGCGACAACUAAAACGAA   76

2.5 Sequence 5354 from Patent EP2985353 NA coding protein psRNATarget
JB169406.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||*|||||||||
targets:53   UAUUCAGCGACAAAUAAAAAGAA   75

2.5 Sequence 7070 from Patent EP2559767 NA coding protein psRNATarget
HI409961.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||*|||||||||
targets:53   UAUUCAGCGACAAAUAAAAAGAA   75

2.5 Sequence 8086 from Patent EP2074227 NA coding protein psRNATarget
HI408945.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||*|||||||||
targets:53   UAUUCAGCGACAAAUAAAAAGAA   75

2.5 Sequence 7070 from Patent EP2074227 NA coding protein psRNATarget
JB170422.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||*|||||||||
targets:53   UAUUCAGCGACAAAUAAAAAGAA   75

2.5 Sequence 8086 from Patent EP2559767 NA coding protein psRNATarget
LQ241075.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||*|||||||||
targets:53   UAUUCAGCGACAAAUAAAAAGAA   75

2.5 Sequence 7070 from Patent EP2985353 NA coding protein psRNATarget
LQ242091.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*|||||*|||||||||
targets:53   UAUUCAGCGACAAAUAAAAAGAA   75

2.5 Sequence 8086 from Patent EP2985353 NA coding protein psRNATarget
HI403062.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*||||||||||||*||
targets:42   UAUUCAGCGACAACUAAAAAUAA   64

2.5 Sequence 1187 from Patent EP2074227 NA coding protein psRNATarget
JB163523.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*||||||||||||*||
targets:42   UAUUCAGCGACAACUAAAAAUAA   64

2.5 Sequence 1187 from Patent EP2559767 NA coding protein psRNATarget
LQ235192.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||=|||*||||||||||||*||
targets:42   UAUUCAGCGACAACUAAAAAUAA   64

2.5 Sequence 1187 from Patent EP2985353 NA coding protein psRNATarget
LQ240700.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||*|||*|||||*|||||||||
targets:53   UAUNCAGCGACAAAUAAAAAGAA   75

2.5 Sequence 6695 from Patent EP2985353 NA coding protein psRNATarget
HI408570.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||*|||*|||||*|||||||||
targets:53   UAUNCAGCGACAAAUAAAAAGAA   75

2.5 Sequence 6695 from Patent EP2074227 NA coding protein psRNATarget
JB169031.1
ncRNA:23   AUAGGUCACUGUUGAUUUUUCUU   1
  |||*|||*|||||*|||||||||
targets:53   UAUNCAGCGACAAAUAAAAAGAA   75

2.5 Sequence 6695 from Patent EP2559767 NA coding protein psRNATarget
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