| ncRNA ID | novel_zma_miR2485 |
| Species | Zea mays |
| Class | miRNA |
| Genome position | Chr1:288423368-288423489 [-] |
| Reference genome | RefGen_v4 |
| Source | SRR2089712;SRR2089713;SRR5451006 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AAAGCUAGAACGACUUAUAAUUUG - 24 |
| Stem-loop(if miRNA) |
-- A G A A UAA A A C AAUUGUAAG CGUUCUGGCUUUU UAG UACAU GUUUUU U UGUAU UAGA AUAA ||||||||| ||||||||||||| ||| ||||| |||||| | ||||| |||| |||U UUAAUAUUC GCAAGAUCGAAAA AUC AUGUA CGAAAA A GCGUG AUCU UAUG GU A G C C -CG C A A |
| Stem-loop sequence | AAUUGUAAGACGUUCUGGCUUUUGUAGAUACAUAGUUUUUUAAUAUGUAUAUAGACAUAAUGUAUAUCUAAGUGCGCAGCAAAAGCCAUGUACCUAGAAAAGCUAGAACGACUUAUAAUUUG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_020550191.1 |
|
0.0 | PREDICTED: Zea mays proline-rich receptor-like protein kinase PERK1 (LOC103649993), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
| EZ094922.1 |
|
3.0 | TSA: Zea mays contig30574, mRNA sequence | NA | coding protein | psRNATarget |