ncRNA ID | osa-miR1882c |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr7:9122411-9122540 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 7 - AGAUUGCUUUCAAGGUCAUUUCUU - 30 |
Stem-loop(if miRNA) |
-UA           U              U           CA        A  U     U   A    UCCUAGAUUGC UUCAAGGUCAUUUC UUAGGGAACCC  UUCCCAUA AU CAGUA CCA A    ||||||||||| |||||||||||||| |||||||||||  |||||||| || ||||| |||    AGGAUCUAACG AGGUUCUAGUAAAG AAUCCCUUGGG  AAGGGUAU UA GUUGU GGU G UUG           C              C           -A        C  U     U   C |
Stem-loop sequence | UAUCCUAGAUUGCUUUCAAGGUCAUUUCUUUAGGGAACCCCAUUCCCAUAAAUUCAGUAUCCAAAGCUGGUUGUUGUAUCUAUGGGAAAGGGUUCCCUAACGAAAUGAUCUUGGACGCAAUCUAGGAGUU |
1 | PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008). |