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BaseInfo

ncRNA ID novel_zma_miR2475
Species Zea mays
Class miRNA
Genome position Chr1:249217880-249217950 [+]
Reference genome RefGen_v4
Source SRR2089712;SRR2287165;SRR2089699;SRR2089707;SRR2089708
Length 24
Mature sequence(if miRNA) 1 - AACUUACUAGAGGAGGCCGUAGGA - 24
Stem-loop(if miRNA) --     A       A                 UG
  AACUU CUAGAGG GGCCGUAGGAAGUUAGC  C
  ||||| ||||||| |||||||||||||||||  C
  UUGAA GAUCUCC UCGGUAUCCUUCAAUCG  C
GA     G       G                 UA
Stem-loop sequence AACUUACUAGAGGAGGCCGUAGGAAGUUAGCUGCCCAUGCUAACUUCCUAUGGCUGCCUCUAGGAAGUUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT086229.2
ncRNA:24   AGGAUGCCGGAGGAGAUCAUUCAA   1
  |=||||||||||||||||*|||||
targets:1137   UUCUACGGCCUCCUCUAGAAAGUU   1160

1.5 Zea mays full-length cDNA clone ZM_BFc0134M03 mRNA, complete cds NA coding protein psRNATarget
BT086229.2
ncRNA:24   AGGAUGCCGGAGGAGAUCAUUCAA   1
  |||||||*||||||||||*|||||
targets:1178   UCCUACGACCUCCUCUAGGAAGUU   1201

2.5 Zea mays full-length cDNA clone ZM_BFc0134M03 mRNA, complete cds NA coding protein psRNATarget