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BaseInfo

ncRNA ID	novel_zma_miR2467
Species	Zea mays
Class	miRNA
Genome position	Chr1:205576578-205576644 [+]
Reference genome	RefGen_v4
Source	SRR2089712;SRR2089713;SRR2089714;SRR2089715;SRR2089701;SRR2089707
Length	24
Mature sequence(if miRNA)	44 - GAACUAGAACGGAAUGGCUCCAAU - 67
Stem-loop(if miRNA)	--C             C C      ---GCU   G    GGAGUCGUUCUGU C AGUUUU      GCU U    ||||||||||||| | ||||||      |||    CCUCGGUAAGGCA G UCAAGA      UGG U UAA             A A      AAACAU   U
Stem-loop sequence	CGGAGUCGUUCUGUCCCAGUUUUGCUGCUGUUUGGUUACAAAAGAACUAGAACGGAAUGGCUCCAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020546669.1	ncRNA:24   UAACCUCGGUAAGGCAAGAUCAAG   1   |||||||=||||=||||||||||| targets:24   AUUGGAGUCAUUUCGUUCUAGUUC   47 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC103643194), transcript variant X1, mRNA	NA	coding protein	psRNATarget
HI409686.1	ncRNA:24   UAACCUCGGUAAGGCAAGAUCAAG   1   ||||||||||*||||||||||||* targets:104   AUUGGAGCCACUCCGUUCUAGUUA   127 Target Full Sequence	2.0	Sequence 7811 from Patent EP2074227	NA	coding protein	psRNATarget
JB170147.1	ncRNA:24   UAACCUCGGUAAGGCAAGAUCAAG   1   ||||||||||*||||||||||||* targets:104   AUUGGAGCCACUCCGUUCUAGUUA   127 Target Full Sequence	2.0	Sequence 7811 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241816.1	ncRNA:24   UAACCUCGGUAAGGCAAGAUCAAG   1   ||||||||||*||||||||||||* targets:104   AUUGGAGCCACUCCGUUCUAGUUA   127 Target Full Sequence	2.0	Sequence 7811 from Patent EP2985353	NA	coding protein	psRNATarget
HI408626.1	ncRNA:24   UAACCUCGGUAAGGCAAGAUCAAG   1   ||||||||*|*||||||||||||= targets:136   AUUGGAGCGACUCCGUUCUAGUUU   159 Target Full Sequence	3.0	Sequence 6751 from Patent EP2074227	NA	coding protein	psRNATarget
JB169087.1	ncRNA:24   UAACCUCGGUAAGGCAAGAUCAAG   1   ||||||||*|*||||||||||||= targets:136   AUUGGAGCGACUCCGUUCUAGUUU   159 Target Full Sequence	3.0	Sequence 6751 from Patent EP2559767	NA	coding protein	psRNATarget
LQ240756.1	ncRNA:24   UAACCUCGGUAAGGCAAGAUCAAG   1   ||||||||*|*||||||||||||= targets:136   AUUGGAGCGACUCCGUUCUAGUUU   159 Target Full Sequence	3.0	Sequence 6751 from Patent EP2985353	NA	coding protein	psRNATarget
BT084215.2	ncRNA:24   UAACCUCGGUAAGGCAAGAUCAAG   1   |*|*|||||=*||||||||||||* targets:1134   AAUAGAGCCGCUCCGUUCUAGUUA   1157 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0090B20 mRNA, complete cds	NA	coding protein	psRNATarget