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BaseInfo

ncRNA ID	novel_zma_miR2465
Species	Zea mays
Class	miRNA
Genome position	Chr1:201935808-201935922 [+]
Reference genome	RefGen_v4
Source	SRR2089712
Length	24
Mature sequence(if miRNA)	92 - GUAUAUUUUAUAUGGUUUAGGGCA - 115
Stem-loop(if miRNA)	--CA                  ---UUUUAAAA          GC     -   G U A     CUAAAUUAUAUAAAAUAU           AAAUUAUAGG  AUUUU AUA G C C     ||||||||||||||||||           ||||||||||  ||||| ||| | | A     GAUUUGGUAUAUUUUAUA           UUUAAUAUUC  UAAAA UAU C G U ACGG                  UGAACAAAAAA          UA     A   A U U
Stem-loop sequence	CACUAAAUUAUAUAAAAUAUUUUUAAAAAAAUUAUAGGGCAUUUUAUAGGUCACAUUGUCAUAUAAAAAUAUCUUAUAAUUUAAAAAACAAGUAUAUUUUAUAUGGUUUAGGGCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008656603.2	ncRNA:24   ACGGGAUUUGGUAUAUUUUAUAUG   1   *|*|=||||=*||||||||||||= targets:2219   GGACUUAAAUAAUAUAAAAUAUAU   2242 Target Full Sequence	3.0	PREDICTED: Zea mays PR5-like receptor kinase (LOC100279755), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008656601.2	ncRNA:24   ACGGGAUUUGGUAUAUUUUAUAUG   1   *|*|=||||=*||||||||||||= targets:2217   GGACUUAAAUAAUAUAAAAUAUAU   2240 Target Full Sequence	3.0	PREDICTED: Zea mays PR5-like receptor kinase (LOC100279755), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008656602.2	ncRNA:24   ACGGGAUUUGGUAUAUUUUAUAUG   1   *|*|=||||=*||||||||||||= targets:2181   GGACUUAAAUAAUAUAAAAUAUAU   2204 Target Full Sequence	3.0	PREDICTED: Zea mays PR5-like receptor kinase (LOC100279755), transcript variant X2, mRNA	NA	coding protein	psRNATarget
BT067456.1	ncRNA:24   ACGGGAUUUGGUAUAUUUUAUAUG   1   *|*|=||||=*||||||||||||= targets:2186   GGACUUAAAUAAUAUAAAAUAUAU   2209 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0051O03 mRNA, complete cds	NA	coding protein	psRNATarget
BT062886.1	ncRNA:24   ACGGGAUUUGGUAUAUUUUAUAUG   1   *|*|=||||=*||||||||||||= targets:2108   GGACUUAAAUAAUAUAAAAUAUAU   2131 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0004D02 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020542075.1	ncRNA:24   ACGGGAUUUGGUAUAUUUUAUAUG   1   *|*|=||||=*||||||||||||= targets:1639   GGACUUAAAUAAUAUAAAAUAUAU   1662 Target Full Sequence	3.0	PREDICTED: Zea mays PR5-like receptor kinase (LOC100279755), transcript variant X4, mRNA	NA	coding protein	psRNATarget
BT054816.1	ncRNA:24   ACGGGAUUUGGUAUAUUUUAUAUG   1   *|*|=||||=*||||||||||||= targets:1646   GGACUUAAAUAAUAUAAAAUAUAU   1669 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0076O21 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001152713.1	ncRNA:24   ACGGGAUUUGGUAUAUUUUAUAUG   1   *|*|=||||=*||||||||||||= targets:1646   GGACUUAAAUAAUAUAAAAUAUAU   1669 Target Full Sequence	3.0	Zea mays PR5-like receptor kinase (LOC100279755), mRNA	NA	coding protein	psRNATarget