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BaseInfo

ncRNA ID	novel_zma_miR2462
Species	Zea mays
Class	miRNA
Genome position	Chr1:181982070-181982185 [+]
Reference genome	RefGen_v4
Source	SRR2089712;SRR2287160;SRR2287163;SRR2287165;SRR5451005;SRR2089700;SRR2089705
Length	24
Mature sequence(if miRNA)	1 - AAGGGCGGACUGUCCGCGGCCUAG - 24
Stem-loop(if miRNA)	--AA G            C G        -     G  CCG   - -CU  U     -   U     G GCGGACUGUCCG G CCUAGGGC UGGAC GU   CGG C   GG GCAGG AGC C     | |||||||||||| | |||||||| ||||| ||   ||| |   || ||||| |||     C CGCCUGGCAGGC C GGAUCCCG GCCUG CA   GCC G   UC CGUCC UUG G CGUG G            - G        C     G  --A   A CAG  -     C   G
Stem-loop sequence	AAGGGCGGACUGUCCGCGGCCUAGGGCUGGACGGUCCGCGGCCUGGUGCAGGAGCUCGGGUUCCCUGCCUGACGACCGAACGGUCCGCGCCCUAGGGCCGGACGGUCCGCGCGUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001196968.1	ncRNA:24   GA-UCCGGCGCCUGUCAGGCGGGAA   1   ||-||||||||||||||||||||*| targets:1264   CUCAGGCCGCGGACAGUCCGCCCCU   1288 Target Full Sequence	1.5	Zea mays uncharacterized LOC100502490 (LOC100502490), mRNA	NA	coding protein	psRNATarget
BT088349.1	ncRNA:24   GA-UCCGGCGCCUGUCAGGCGGGAA   1   ||-||||||||||||||||||||*| targets:1264   CUCAGGCCGCGGACAGUCCGCCCCU   1288 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0151F11 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020539115.1	ncRNA:24   GAUCCGGCGCCUGUCAGGCGGGAA   1   |*||||||||||||||||||||*| targets:2708   CCAGGCCGCGGACAGUCCGCCCCU   2731 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100384241 (gpm299b), transcript variant X7, mRNA	NA	coding protein	psRNATarget