ncRNA ID | novel_zma_miR2454 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:49016133-49016302 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583944;SRR2647390 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACUGGUGGUUAUCUUAACACAACC - 24 |
Stem-loop(if miRNA) |
--                                                          U  AACACC           A   U   ACUGGUGGUUAUCUUAACACAACCGCCAGUGGAAAUAGGAUGUUUCCACUGGCGGUUG GU      AACCGCCAGUG AAA U   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||      ||||||||||| |||   UGACCGCCAAUAGAAUUGUGUUGGCGGUCACCUUUAUCCUACAAAGGUGACCGCCAAU CA      UUGGCGGUCAC UUU G GG                                                          U  AUUCUA           C   A |
Stem-loop sequence | ACUGGUGGUUAUCUUAACACAACCGCCAGUGGAAAUAGGAUGUUUCCACUGGCGGUUGUGUAACACCAACCGCCAGUGAAAAUUGAUUUCCACUGGCGGUUAUCUUAACUUAACCGCCAGUGGAAACAUCCUAUUUCCACUGGCGGUUGUGUUAAGAUAACCGCCAGUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT063235.2 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFc0041B21 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
BT063734.2 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFc0101P15 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
BT068916.2 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0272E21 mRNA, complete cds | NA | coding protein | psRNATarget |