ncRNA ID | osa-miR1428f-5p |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr7:5451329-5451437 [-] |
Reference genome | MSU7 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 79 - AAUUCACAGGCCCUAUCUUGUG - 100 |
Stem-loop(if miRNA) |
-U               A   CC            U AA  A      -CGAU A   GCUUUGCGAAUUCAC GGC  UAUCUUGUGGUA G  CU AGUACG     G U   ||||||||||||||| |||  |||||||||||| |  || ||||||     |   CGAAAUGCUUAAGUG CCG  AUAGAAUACCAU C  GG UUAUGC     C U UG               -   UA            U GG  G      AUGGU U |
Stem-loop sequence | UGCUUUGCGAAUUCACAGGCCCUAUCUUGUGGUAUGAACUAAGUACGCGAUGAUUUCUGGUACGUAUUGGGGGCUUACCAUAAGAUAAUGCCGUGAAUUCGUAAAGCGU |
1 | PMID:19103661
"Characterization and expression profiles of miRNAs in rice seeds"; Xue LJ, Zhang JJ, Xue HW; Nucleic Acids Res. 37:916-930(2009). |