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BaseInfo

ncRNA ID osa-miR1428f-5p
Species Oryza sativa
Class miRNA
Genome position Chr7:5451329-5451437 [-]
Reference genome MSU7
Source miRBase
Length 22
Mature sequence(if miRNA) 79 - AAUUCACAGGCCCUAUCUUGUG - 100
Stem-loop(if miRNA) -U               A   CC            U AA  A      -CGAU A
  GCUUUGCGAAUUCAC GGC  UAUCUUGUGGUA G  CU AGUACG     G U
  ||||||||||||||| |||  |||||||||||| |  || ||||||     |
  CGAAAUGCUUAAGUG CCG  AUAGAAUACCAU C  GG UUAUGC     C U
UG               -   UA            U GG  G      AUGGU U
Stem-loop sequence UGCUUUGCGAAUUCACAGGCCCUAUCUUGUGGUAUGAACUAAGUACGCGAUGAUUUCUGGUACGUAUUGGGGGCUUACCAUAAGAUAAUGCCGUGAAUUCGUAAAGCGU

Reference

1 PMID:19103661
"Characterization and expression profiles of miRNAs in rice seeds";
Xue LJ, Zhang JJ, Xue HW;
Nucleic Acids Res. 37:916-930(2009).