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BaseInfo

ncRNA ID	novel_zma_miR2446
Species	Zea mays
Class	miRNA
Genome position	Chr9:84259778-84259854 [-]
Reference genome	RefGen_v4
Source	SRR2089712
Length	24
Mature sequence(if miRNA)	54 - AAUUUCGGGUCGGGUUGUUCGGGU - 77
Stem-loop(if miRNA)	---               UGU        UAAAUAA   GG U    AAUUUCGGGUCGGGU   UCGGGUUU       UUC  G A    |||||||||||||||   ||||||||       |||  |    UUAAAGCCCAGCUCA   AGCCCAAA       GAG  C U CUU               ---        -----CG   AA U
Stem-loop sequence	AAUUUCGGGUCGGGUUGUUCGGGUUUUAAAUAAUUCGGGUAUUCAAGAGGCAAACCCGAACUCGACCCGAAAUUUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU943161.1	ncRNA:24   UGGGCUUGUUGGGCUGGGCUUUAA   1   |||||||=*|=||||||||||||| targets:1752   ACCCGAAUUAUCCGACCCGAAAUU   1775 Target Full Sequence	3.0	Zea mays clone 1573889 mRNA sequence	NA	coding protein	psRNATarget
BT085051.2	ncRNA:24   UGGGCUUGUUGGGCUGGGCUUUAA   1   ||*|||||*||||||||||||*|| targets:840   ACACGAACUACCCGACCCGAAUUU   863 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0234H18 mRNA, complete cds	NA	coding protein	psRNATarget
EU944440.1	ncRNA:24   UGGGCUUGUUGGGCUGGGCUUUAA   1   ||||*||*|||||||||||||||| targets:632   ACCCAAAAAACCCGACCCGAAAUU   655 Target Full Sequence	1.0	Zea mays clone 218592 mRNA sequence	NA	coding protein	psRNATarget
NM_001154449.1	ncRNA:24   UGGGCUUGUUGGGCUGGGCUUUAA   1   ||||*||*|||||||||||||||| targets:907   ACCCAAAAAACCCGACCCGAAAUU   930 Target Full Sequence	1.0	Zea mays glyoxalase/bleomycin resistance protein/dioxygenase (LOC100281531), mRNA	NA	coding protein	psRNATarget
EU957014.1	ncRNA:24   UGGGCUUGUUGGGCUGGGCUUUAA   1   ||||*||*|||||||||||||||| targets:907   ACCCAAAAAACCCGACCCGAAAUU   930 Target Full Sequence	1.0	Zea mays clone 1580507 glyoxalase/bleomycin resistance protein/dioxygenase mRNA, complete cds	NA	coding protein	psRNATarget