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BaseInfo

ncRNA ID novel_zma_miR2443
Species Zea mays
Class miRNA
Genome position Chr9:114149618-114149675 [-]
Reference genome RefGen_v4
Source SRR2089712
Length 24
Mature sequence(if miRNA) 35 - AAAUAAGGUUAUUUUCGGCGGUCA - 58
Stem-loop(if miRNA) --     --                 CACU
  AAAUA  AGGUUAUUUUCGGCGGU    G
  |||||  |||||||||||||||||
  UUUAU  UCCAAUAAAAGCCGCCG    A
CU     UC                 ACAC
Stem-loop sequence AAAUAAGGUUAUUUUCGGCGGUCACUGACACAGCCGCCGAAAAUAACCUCUUAUUUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT085515.1
ncRNA:24   ACUG-GCGGCUUUUAUUGGAAUAAA   1
  |*||-=|=||||||||||*||||||
targets:1150   UAACGUGUCGAAAAUAACAUUAUUU   1174

2.5 Zea mays full-length cDNA clone ZM_BFc0028G11 mRNA, complete cds NA coding protein psRNATarget