ncRNA ID | novel_zma_miR2441 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:163284331-163284463 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089712 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGGCAUCGAGUGAAGGGUAGCGUC - 24 |
Stem-loop(if miRNA) |
----AG  A        A                U  GCCCC   AUU    C  UGA  G     UUC          GC UCGAGUGA GGGUAGCGUCUUCGCC UC     AAC   UGCC UC   GG ACCAG   GACC       || |||||||| |||||||||||||||| ||     |||   |||| ||   || |||||   |||A       UG AGCUCGCU CCCGUCGCAGAGGUGG AG     UUG   GCGG AG   CC UGGUC   CUGA CCUUGG  A        -                U  ----A   -CU    A  ---  G     -UA    |
Stem-loop sequence | AGGCAUCGAGUGAAGGGUAGCGUCUUCGCCUUCGCCCCAACAUUUGCCCUCUGAGGGACCAGUUCGACCAAGUCAUCUGGUGCCGAAGGCGUCGUUAGAUGGUGGAGACGCUGCCCUCGCUCGAAGUGGUUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU973405.1 |
|
1.5 | Zea mays clone 398173 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget |