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BaseInfo

ncRNA ID novel_zma_miR2441
Species Zea mays
Class miRNA
Genome position Chr1:163284331-163284463 [+]
Reference genome RefGen_v4
Source SRR2089712
Length 24
Mature sequence(if miRNA) 1 - AGGCAUCGAGUGAAGGGUAGCGUC - 24
Stem-loop(if miRNA) ----AG  A        A                U  GCCCC   AUU    C  UGA  G     UUC   
      GC UCGAGUGA GGGUAGCGUCUUCGCC UC     AAC   UGCC UC   GG ACCAG   GACC
      || |||||||| |||||||||||||||| ||     |||   |||| ||   || |||||   |||A
      UG AGCUCGCU CCCGUCGCAGAGGUGG AG     UUG   GCGG AG   CC UGGUC   CUGA
CCUUGG  A        -                U  ----A   -CU    A  ---  G     -UA   
Stem-loop sequence AGGCAUCGAGUGAAGGGUAGCGUCUUCGCCUUCGCCCCAACAUUUGCCCUCUGAGGGACCAGUUCGACCAAGUCAUCUGGUGCCGAAGGCGUCGUUAGAUGGUGGAGACGCUGCCCUCGCUCGAAGUGGUUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU973405.1
ncRNA:24   CUGCGAUGGGAAGUGAGCUACGGA   1
  |||||||||||||=||||||||||
targets:394   GACGCUACCCUUCGCUCGAUGCCU   417

1.5 Zea mays clone 398173 hypothetical protein mRNA, complete cds NA coding protein psRNATarget