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BaseInfo

ncRNA ID	novel_zma_miR2439
Species	Zea mays
Class	miRNA
Genome position	Chr9:13412274-13412350 [+]
Reference genome	RefGen_v4
Source	SRR2089712;SRR2089715
Length	24
Mature sequence(if miRNA)	54 - GUUCUAUGUGGAUUGGAGUGGGUU - 77
Stem-loop(if miRNA)	-U       -           CC  A    AUAGAAAUA   CUCAUUC AAUCCACAUAG  AC UAGG         A   ||||||| |||||||||||  || ||||   GGGUGAG UUAGGUGUAUC  UG AUCC         U UU       G           -U  C    GGAACAAAG
Stem-loop sequence	UCUCAUUCAAUCCACAUAGCCACAUAGGAUAGAAAUAAUGAAACAAGGCCUACGUUCUAUGUGGAUUGGAGUGGGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008651067.2	ncRNA:24   UUGGGUGAGGUUAGGUGUAUCUUG   1   ||=||||||=|||||||||=|||| targets:51   AAUCCACUCUAAUCCACAUGGAAC   74 Target Full Sequence	2.5	PREDICTED: Zea mays RING-H2 finger protein ATL14 (LOC103629965), mRNA	NA	coding protein	psRNATarget
EZ077876.1	ncRNA:24   UUGGGUGAGGUUAGGUGUAUCUUG   1   ||=*|||||||||||||||||||= targets:75   AAUACACUCCAAUCCACAUAGAAU   98 Target Full Sequence	1.0	TSA: Zea mays contig13515, mRNA sequence	NA	coding protein	psRNATarget
EZ083778.1	ncRNA:24   UUGGGUGAGGUUAGGUGUAUCUUG   1   ||=*|||||=|||||||||||||= targets:24   AAUACACUCUAAUCCACAUAGAAU   47 Target Full Sequence	2.0	TSA: Zea mays contig19422, mRNA sequence	NA	coding protein	psRNATarget
EZ066328.1	ncRNA:24   UUGGGUGAGGUUAGGUGUAUCUUG   1   ||=*||||=||||||||||||||= targets:67   AAUACACUUCAAUCCACAUAGAAU   90 Target Full Sequence	2.0	TSA: Zea mays contig01962, mRNA sequence	NA	coding protein	psRNATarget