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BaseInfo

ncRNA ID novel_zma_miR2422
Species Zea mays
Class miRNA
Genome position Chr8:57982281-57982355 [-]
Reference genome RefGen_v4
Source SRR2089712;SRR2089713
Length 21
Mature sequence(if miRNA) 55 - CGGAGGAAAUUGGAGGGGCUA - 75
Stem-loop(if miRNA) --      AA    G              CC     A
  CGGAGG  AUUG AGGGGCUAAAAUCC  UUUUU U
  ||||||  |||| ||||||||||||||  ||||| U
  GCCUCC  UAAC UUCCCGAUUUUAGG  AAAGA U
UG      CC    A              AA     A
Stem-loop sequence CGGAGGAAAUUGGAGGGGCUAAAAUCCCCUUUUUAUUUAAGAAAAAGGAUUUUAGCCCUUACAAUCCCCUCCGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI403389.1
ncRNA:21   AUCGGGGAGGUUAAAGGAGGC   1
  ||||||||||||||*||||||
targets:74   UAGCCCCUCCAAUUCCCUCCG   94

1.5 Sequence 1514 from Patent EP2074227 NA coding protein psRNATarget
LQ235519.1
ncRNA:21   AUCGGGGAGGUUAAAGGAGGC   1
  ||||||||||||||*||||||
targets:74   UAGCCCCUCCAAUUCCCUCCG   94

1.5 Sequence 1514 from Patent EP2985353 NA coding protein psRNATarget
JB163850.1
ncRNA:21   AUCGGGGAGGUUAAAGGAGGC   1
  ||||||||||||||*||||||
targets:74   UAGCCCCUCCAAUUCCCUCCG   94

1.5 Sequence 1514 from Patent EP2559767 NA coding protein psRNATarget