Search result

BaseInfo

ncRNA ID osa-miR167d-5p
Species Oryza sativa
Class miRNA
Genome position Chr7:4166295-4166404 [-]
Reference genome MSU7
Source miRBase
Length 21
Mature sequence(if miRNA) 80 - UGAAGCUGCCAGCAUGAUCUG - 100
Stem-loop(if miRNA)    U  G  C         -              -----GAGU   UAUUAGGUGAG
CAU AG AG UGAAGCUGC CAGCAUGAUCUGAU         GCU           G
||| || || ||||||||| ||||||||||||||         |||
GUG UC UC ACUUUGACG GUCGUACUAGACUA         CCG           G
   U  G  U         U              GAAACAAAA   UCAGUUAAGAC
Stem-loop sequence CAUUAGGAGCUGAAGCUGCCAGCAUGAUCUGAUGAGUGCUUAUUAGGUGAGGGCAGAAUUGACUGCCAAAACAAAGAUCAGAUCAUGCUGUGCAGUUUCAUCUGCUUGUG

Reference

1 PMID:15200956
"Computational identification of plant microRNAs and their targets, including a stress-induced miRNA";
Jones-Rhoades MW, Bartel DP;
Mol Cell. 14:787-799(2004).
2 PMID:21901091
"Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors";
Du P, Wu J, Zhang J, Zhao S, Zheng H, Gao G, Wei L, Li Y;
PLoS Pathog. 7:e1002176(2011).