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BaseInfo

ncRNA ID	novel_zma_miR2419
Species	Zea mays
Class	miRNA
Genome position	Chr8:93238926-93239021 [-]
Reference genome	RefGen_v4
Source	SRR2089712;SRR2089699
Length	21
Mature sequence(if miRNA)	1 - UUUUUGUGAGAGGCUGCAAAC - 21
Stem-loop(if miRNA)	--        C             AG     CA     --   UU  GU   UUGCAGUC CUCAUAAAAAGGA  AUAGA  UCACU  UAG  GU  U   |||||||| |||||||||||||  |||||  |||||  |||  ||   AACGUCGG GAGUGUUUUUCCU  UAUCU  AGUGG  GUC  CG  A CA        A             CU     AA     GC   UU  UU
Stem-loop sequence	UUGCAGUCCCUCAUAAAAAGGAAGAUAGACAUCACUUAGUUGUGUUAUUGCUUCUGCGGGUGAAAUCUAUUCUCCUUUUUGUGAGAGGCUGCAAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ235188.1	ncRNA:21   CAAACGUCGGAGAGUGUUUUU   1   ||||||||||||||||||||| targets:12   GUUUGCAGCCUCUCACAAAAA   32 Target Full Sequence	0.0	Sequence 1183 from Patent EP2985353	NA	coding protein	psRNATarget
JB163519.1	ncRNA:21   CAAACGUCGGAGAGUGUUUUU   1   ||||||||||||||||||||| targets:12   GUUUGCAGCCUCUCACAAAAA   32 Target Full Sequence	0.0	Sequence 1183 from Patent EP2559767	NA	coding protein	psRNATarget
HI403058.1	ncRNA:21   CAAACGUCGGAGAGUGUUUUU   1   ||||||||||||||||||||| targets:12   GUUUGCAGCCUCUCACAAAAA   32 Target Full Sequence	0.0	Sequence 1183 from Patent EP2074227	NA	coding protein	psRNATarget
EU968721.1	ncRNA:21   CAAACGUCGGAGAGUGUUUUU   1   |||||||||||||||=||||| targets:931   GUUUGCAGCCUCUCAUAAAAA   951 Target Full Sequence	1.5	Zea mays clone 323697 tyrosine specific protein phosphatase family protein mRNA, complete cds	NA	coding protein	psRNATarget
JB163679.1	ncRNA:21   CAAACGUCGGAGAGUGUUUUU   1   ||||||||||*|||||||||| targets:13   GUUUGCAGCCCCUCACAAAAA   33 Target Full Sequence	1.5	Sequence 1343 from Patent EP2559767	NA	coding protein	psRNATarget
HI403228.1	ncRNA:21   CAAACGUCGGAGAGUGUUUUU   1   ||||||||||*|||||||||| targets:13   GUUUGCAGCCCCUCACAAAAA   33 Target Full Sequence	1.5	Sequence 1353 from Patent EP2074227	NA	coding protein	psRNATarget
JB163689.1	ncRNA:21   CAAACGUCGGAGAGUGUUUUU   1   ||||||||||*|||||||||| targets:13   GUUUGCAGCCCCUCACAAAAA   33 Target Full Sequence	1.5	Sequence 1353 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235358.1	ncRNA:21   CAAACGUCGGAGAGUGUUUUU   1   ||||||||||*|||||||||| targets:13   GUUUGCAGCCCCUCACAAAAA   33 Target Full Sequence	1.5	Sequence 1353 from Patent EP2985353	NA	coding protein	psRNATarget
HI403218.1	ncRNA:21   CAAACGUCGGAGAGUGUUUUU   1   ||||||||||*|||||||||| targets:13   GUUUGCAGCCCCUCACAAAAA   33 Target Full Sequence	1.5	Sequence 1343 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235348.1	ncRNA:21   CAAACGUCGGAGAGUGUUUUU   1   ||||||||||*|||||||||| targets:13   GUUUGCAGCCCCUCACAAAAA   33 Target Full Sequence	1.5	Sequence 1343 from Patent EP2985353	NA	coding protein	psRNATarget
XM_008653247.2	ncRNA:21   CAAACGUCGGAGAGUGUUUUU   1   ||||||||||*|||||||||| targets:28   GUUUGCAGCCCCUCACAAAAA   48 Target Full Sequence	1.5	PREDICTED: Zea mays 50S ribosomal protein L18 (LOC103631773), mRNA	NA	coding protein	psRNATarget
XM_020545800.1	ncRNA:21   CAAACGUCGGAGAGUGUUUUU   1   ||||||||||*|||||||||| targets:873   GUUUGCAGCCCCUCACAAAAA   893 Target Full Sequence	1.5	PREDICTED: Zea mays embryo sac development arrest 6 (LOC103641842), mRNA	NA	coding protein	psRNATarget
XM_020547144.1	ncRNA:21   CAAACGUCGGAGAGUGUUUUU   1   ||||||||||*|||||||||| targets:145   GUUUGCAGCCCCUCACAAAAA   165 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103636662 (LOC103636662), mRNA	NA	coding protein	psRNATarget
X55314.1	ncRNA:21   CAAACGUCGGAGAGUGUUUUU   1   ||||||||||*|||||||||| targets:915   GUUUGCAGCCCCUCACAAAAA   935 Target Full Sequence	1.5	Zea mays A2 gene	NA	coding protein	psRNATarget