Search result

BaseInfo

ncRNA ID	novel_zma_miR2393
Species	Zea mays
Class	miRNA
Genome position	Chr8:141752015-141752207 [+]
Reference genome	RefGen_v4
Source	SRR2089712;SRR2089715;SRR2089702;SRR2089704;SRR2089708
Length	24
Mature sequence(if miRNA)	1 - AACCGGAGGGAAUUGAAGGGGCUA - 24
Stem-loop(if miRNA)	--            -UU  ----------A GG   AAAAUCUCCCUCUUAUUCAAUUGGUAACCUUAAACCCCCUUCGGGAUUGGAGGGAAUUGAGGUGGAA   AACCGGAGGGAA   GA           G  GCU                                                                   A   ||||||||||||   ||           |  |||   UUGGCCUCUCUU   CU           G  GGA                                                                   U UU            UAU  CCGCAAUCUUA --   AGAAUCCCGAUCAAACCUUUGAUUUUAGAGGAAACCCUAACUUCCUCUAACCCUUCCUUUAAUCAAG
Stem-loop sequence	AACCGGAGGGAAUUGAAGGGGCUAAAAUCUCCCUCUUAUUCAAUUGGUAACCUUAAACCCCCUUCGGGAUUGGAGGGAAUUGAGGUGGAAAUGAACUAAUUUCCUUCCCAAUCUCCUUCAAUCCCAAAGGAGAUUUUAGUUUCCAAACUAGCCCUAAGAAGGGAUUCUAACGCCUCUAUUUCUCUCCGGUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008654495.2	ncRNA:24   AUCGGGGAAGUUAAGGGAGGCCAA   1   |||||||||||||*|||||||||| targets:1113   UAGCCCCUUCAAUCCCCUCCGGUU   1136 Target Full Sequence	1.5	PREDICTED: Zea mays probable GMP synthase [glutamine-hydrolyzing] (LOC103632764), mRNA	NA	coding protein	psRNATarget