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BaseInfo

ncRNA ID	novel_zma_miR2382
Species	Zea mays
Class	miRNA
Genome position	Chr7:87518832-87518903 [+]
Reference genome	RefGen_v4
Source	SRR2089712
Length	24
Mature sequence(if miRNA)	49 - GGCCUCAGGGUCGGAUCGUCCGCA - 72
Stem-loop(if miRNA)	--     C         CC    G     U     G   CGGAU GUCCGGCCC  AGGC CGGAC GUCCG A   ||||| |||||||||  |||| ||||| ||||| C   GCCUG UAGGCUGGG  UCCG GCCUG CAGGC C AC     C         AC    -     C     G
Stem-loop sequence	CGGAUCGUCCGGCCCCCAGGCGCGGACUGUCCGGACCGCGGACCGUCCGGCCUCAGGGUCGGAUCGUCCGCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008658706.2	ncRNA:24   ACGCCUGCUAGGCUGGGACUCCGG   1   ||||||||=||||=|||||||||| targets:1387   UGCGGACGGUCCGGCCCUGAGGCC   1410 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103636343 (LOC103636343), mRNA	NA	coding protein	psRNATarget
EU943239.1	ncRNA:24   ACGCCUGCUAGGCUGGGACUCCGG   1   *|||||||=||||=|||||||||| targets:285   CGCGGACGGUCCGGCCCUGAGGCC   308 Target Full Sequence	2.5	Zea mays clone 1589479 mRNA sequence	NA	coding protein	psRNATarget
EU949855.1	ncRNA:24   ACGCCUGCUAGGCUGGGACUCCGG   1   *|||||||=||||=|||||||||| targets:373   GGCGGACGGUCCGGCCCUGAGGCC   396 Target Full Sequence	2.5	Zea mays clone 449025 mRNA sequence	NA	coding protein	psRNATarget
NM_001174685.1	ncRNA:24   ACGCCUGCUAGGCUGGGACUCCGG   1   *|||||||=||||=|||||||||| targets:1311   CGCGGACGGUCCGGCCCUGAGGCC   1334 Target Full Sequence	2.5	Zea mays uncharacterized LOC100381908 (LOC100381908), mRNA	NA	coding protein	psRNATarget
BT062567.1	ncRNA:24   ACGCCUGCUAGGCUGGGACUCCGG   1   *|||||||=||||=|||||||||| targets:1311   CGCGGACGGUCCGGCCCUGAGGCC   1334 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0315B06 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020539115.1	ncRNA:24   ACGCCUGCUAGGCUGGGACUCCGG   1   *|||||||=||||=|||||||||| targets:2168   GGCGGACGGUCCGGCCCUGAGGCC   2191 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100384241 (gpm299b), transcript variant X7, mRNA	NA	coding protein	psRNATarget