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BaseInfo

ncRNA ID	novel_zma_miR2380
Species	Zea mays
Class	miRNA
Genome position	Chr7:50870835-50870928 [+]
Reference genome	RefGen_v4
Source	SRR2089712;SRR2089700
Length	22
Mature sequence(if miRNA)	73 - GGGACGGUAGGAGGAGGGCGGG - 94
Stem-loop(if miRNA)	--    G    CA G    -   UU  GGGAGCGACGACCCCCCGUCG   CGCC CUCC  C GCCG CCC  GC                     G   |||| ||||  | |||| |||  ||   GCGG GAGG  G UGGC GGG  GC                     U GG    -    AG A    A   CC  CGGGGAGCAGGCUGAAGGUAC
Stem-loop sequence	CGCCGCUCCCACGGCCGCCCUUGCGGGAGCGACGACCCCCCGUCGGUCAUGGAAGUCGGACGAGGGGCCGCCGGGACGGUAGGAGGAGGGCGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU955836.1	ncRNA:22   GGGCGGGAGGAGGAUGGCAGGG   1   *||||||*||||||=||||||| targets:318   GCCGCCCACCUCCUGCCGUCCC   339 Target Full Sequence	2.5	Zea mays clone 1548129 anthocyanin 5-aromatic acyltransferase mRNA, complete cds	NA	coding protein	psRNATarget
NM_001154098.1	ncRNA:22   GGGCGGGAGGAGGAUGGCAGGG   1   *||||||*||||||=||||||| targets:318   GCCGCCCACCUCCUGCCGUCCC   339 Target Full Sequence	2.5	Zea mays anthocyanin 5-aromatic acyltransferase (LOC100281179), mRNA	NA	coding protein	psRNATarget
AY105905.1	ncRNA:22   GGGCGGGAGGAGGAUGGCAGGG   1   *=|||||*|||||||||||||= targets:68   GUCGCCCCCCUCCUACCGUCCU   89 Target Full Sequence	2.0	Zea mays PCO066724 mRNA sequence	NA	coding protein	psRNATarget
NM_001146963.1	ncRNA:22   GGGCGGGAGGAGGAUGGCAGGG   1   *=|||||*|||||||||||||= targets:139   GUCGCCCCCCUCCUACCGUCCU   160 Target Full Sequence	2.0	Zea mays Syntaxin/t-SNARE family protein (cl17115_1(187)), mRNA	NA	coding protein	psRNATarget
BT038827.1	ncRNA:22   GGGCGGGAGGAGGAUGGCAGGG   1   *=|||||*|||||||||||||= targets:139   GUCGCCCCCCUCCUACCGUCCU   160 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0332I22 mRNA, complete cds	NA	coding protein	psRNATarget
EZ109416.1	ncRNA:22   GGGCGGGAGGAGGAUGGCAGGG   1   ==|*||||||||||*||||||| targets:149   UUCUCCCUCCUCCUUCCGUCCC   170 Target Full Sequence	2.5	TSA: Zea mays contig45075, mRNA sequence	NA	coding protein	psRNATarget