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BaseInfo

ncRNA ID osa-miR2918
Species Oryza sativa
Class miRNA
Genome position Chr6:31091921-31092085 [-]
Reference genome MSU7
Source miRBase
Length 21
Mature sequence(if miRNA) 9 - AUCCGUGUUGUCUGCGCUUUA - 29
Stem-loop(if miRNA) ------  --    UUCA       AGAA     GAUUAUUG      C    -  UUUGUUGCACACUUCUGAUGCUGGAGACAGCUG
      GU  AAGC    UGGGCAA    GGAUG        GCAAGC UGCA AU                                 G
      ||  ||||    |||||||    |||||        |||||| |||| ||                                 G
      CA  UUCG    GUCUGUU    CCUAC        CGUUUG AUGG AC                                 A
UAGGAA  AU    ---C       -GUG     ---AUAUA      A    U  AAGGGUCCUUCGACCCGUGAGUUCCCAUAAGAA
Stem-loop sequence GUAAGCUUCAUGGGCAAAGAAGGAUGGAUUAUUGGCAAGCCUGCAAUUUUGUUGCACACUUCUGAUGCUGGAGACAGCUGGGAAAGAAUACCCUUGAGUGCCCAGCUUCCUGGGAACAUGGUAAGUUUGCAUAUACAUCCGUGUUGUCUGCGCUUUAACAAGGAU

Reference

1 PMID:20131478
"Cloning and validation of novel miRNA from basmati rice indicates cross talk between abiotic and biotic stresses";
Sanan-Mishra N, Kumar V, Sopory SK, Mukherjee SK;
Mol Genet Genomics. 282:463-474(2009).