ncRNA ID | osa-miR2918 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr6:31091921-31092085 [-] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 9 - AUCCGUGUUGUCUGCGCUUUA - 29 |
Stem-loop(if miRNA) |
------ -- UUCA AGAA GAUUAUUG C - UUUGUUGCACACUUCUGAUGCUGGAGACAGCUG GU AAGC UGGGCAA GGAUG GCAAGC UGCA AU G || |||| ||||||| ||||| |||||| |||| || G CA UUCG GUCUGUU CCUAC CGUUUG AUGG AC A UAGGAA AU ---C -GUG ---AUAUA A U AAGGGUCCUUCGACCCGUGAGUUCCCAUAAGAA |
Stem-loop sequence | GUAAGCUUCAUGGGCAAAGAAGGAUGGAUUAUUGGCAAGCCUGCAAUUUUGUUGCACACUUCUGAUGCUGGAGACAGCUGGGAAAGAAUACCCUUGAGUGCCCAGCUUCCUGGGAACAUGGUAAGUUUGCAUAUACAUCCGUGUUGUCUGCGCUUUAACAAGGAU |
1 | PMID:20131478
"Cloning and validation of novel miRNA from basmati rice indicates cross talk between abiotic and biotic stresses"; Sanan-Mishra N, Kumar V, Sopory SK, Mukherjee SK; Mol Genet Genomics. 282:463-474(2009). |