Search result

BaseInfo

ncRNA ID	novel_zma_miR2375
Species	Zea mays
Class	miRNA
Genome position	Chr7:51522522-51522640 [-]
Reference genome	RefGen_v4
Source	SRR2089712
Length	24
Mature sequence(if miRNA)	1 - AUAAAUUUAUCUCGUCGUUUAGUC - 24
Stem-loop(if miRNA)	--     UA      C            -A        CC   AUC   AUAUGUGAUAA   CUAAA  ACGAGA AAAUUUAUUAAG  UGAUUAAU  AUG   CGC           U   |||||  |||||| ||||||||||||  ||||||||  |||   |||           A   GAUUU  UGCUCU UUUAAAUAAUUU  AUUAAUUA  UAC   AUC           U CU     GC      A            GG        UA   -CA   GUUACAAAUGA
Stem-loop sequence	CUAAAUAACGAGACAAAUUUAUUAAGAUGAUUAAUCCAUGAUCCGCAUAUGUGAUAAUAUAGUAAACAUUGCUAACCAUAUAUUAAUUAGGUUUAAUAAAUUUAUCUCGUCGUUUAGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020549357.1	ncRNA:24   CUGAUUUGCUGCUCUAUUUAAAUA   1   ||--=|||||||||||||||*||* targets:144   GA--GAACGACGAGAUAAAUGUAG   165 Target Full Sequence	2.5	PREDICTED: Zea mays protein FAR1-RELATED SEQUENCE 5-like (LOC103649134), mRNA	NA	coding protein	psRNATarget
XM_008672726.2	ncRNA:24   CUGAUUUGCUGCUCUAUUUAAAUA   1   ||--=|||||||||||||||*||* targets:456   GA--GAACGACGAGAUAAAUGUAG   477 Target Full Sequence	2.5	PREDICTED: Zea mays protein FAR1-RELATED SEQUENCE 5-like (LOC103648234), mRNA	NA	coding protein	psRNATarget
XM_008658683.2	ncRNA:24   CUGAUUUGCUGCUCUAUUUAAAUA   1   ||--=|||||||||||||||*||* targets:775   GA--GAACGACGAGAUAAAUGUAG   796 Target Full Sequence	2.5	PREDICTED: Zea mays protein FAR1-RELATED SEQUENCE 5-like (LOC103636329), mRNA	NA	coding protein	psRNATarget