ncRNA ID | novel_zma_miR2357 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:275176767-275176903 [-] |
Reference genome | RefGen_v4 |
Source | SRR1583941 |
Length | 24 |
Mature sequence(if miRNA) | 114 - AAUCUGGUGCAUCCAUUUCGCAUC - 137 |
Stem-loop(if miRNA) |
--            C     C C  C        G  -              C             UCC   AAUCUGGUGCAU CAUUU G AU UAACAGCA CA CUAAUUUUGUGAAG ACCCCUUCCACCU   U   |||||||||||| ||||| | || |||||||| || |||||||||||||| |||||||||||||   UUAGACCACGUA GUAGA C UA GUUGUCGU GU GAUUAAAAUGCUUC UGGGGAGGGUGGG   C AU            A     A A  A        G  C              U             CCC |
Stem-loop sequence | AAUCUGGUGCAUCCAUUUCGCAUCUAACAGCAGCACUAAUUUUGUGAAGCACCCCUUCCACCUUCCUCCCCGGGUGGGAGGGGUUCUUCGUAAAAUUAGCUGGUGCUGUUGAAUACAAGAUGAAUGCACCAGAUUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008645476.2 |
|
1.5 | PREDICTED: Zea mays tic20-like protein (LOC100282929), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020551532.1 |
|
1.5 | PREDICTED: Zea mays uncharacterized LOC100282291 (pco125364), transcript variant X1, mRNA | NA | coding protein | psRNATarget |