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BaseInfo

ncRNA ID	novel_zma_miR2355
Species	Zea mays
Class	miRNA
Genome position	Chr7:124926370-124926461 [+]
Reference genome	RefGen_v4
Source	SRR2089712
Length	24
Mature sequence(if miRNA)	1 - CGGAGGGCGGCGGCCGCCUGAGCC - 24
Stem-loop(if miRNA)	--C             C   U     GGUGCUCGU  ACGUCGUCGCGGA    GGAGGGCGGCGGC GCC GAGCC         CG             U    ||||||||||||| ||| |||||         ||    CCUCCCGCUGCCG UGG CUCGG         GC             A GCC             C   C     --------U  GCUUGAAGAAGGC
Stem-loop sequence	CGGAGGGCGGCGGCCGCCUGAGCCGGUGCUCGUCGACGUCGUCGCGGAUACGGAAGAAGUUCGCGUGGCUCCGGUCGCCGUCGCCCUCCCCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU962901.1	ncRNA:24   CCGAGUCCGCCGGCGGCGGGAGGC   1   |||||||*|||||||||||||||* targets:62   GGCUCAGCCGGCCGCCGCCCUCCU   85 Target Full Sequence	2.0	Zea mays clone 246372 dehydrodolichyl diphosphate synthase 6 mRNA, complete cds	NA	coding protein	psRNATarget
BT060828.1	ncRNA:24   CCGAGUCCGCCGGCGGCGGGAGGC   1   |||||||*|||||||||||||||* targets:13   GGCUCAGCCGGCCGCCGCCCUCCU   36 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0056E15 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020541967.1	ncRNA:24   CCGAGUCCGCCGGCGGCGGGAGGC   1   *|||*|||=|||||||||||*||| targets:63   UGCUGAGGUGGCCGCCGCCCACCG   86 Target Full Sequence	2.5	PREDICTED: Zea mays vegetative cell wall protein gp1-like (LOC103644774), mRNA	NA	coding protein	psRNATarget
XM_008657878.2	ncRNA:24   CCG--A---GUCCGCCGGCGGCGGGAGGC   1   |||--|---|=|||||||||||||||*|| targets:74   GGCGAUGACCGGGCGGCCGCCGCCCUACG   102 Target Full Sequence	2.5	PREDICTED: Zea mays protein PARTING DANCERS (LOC103635416), mRNA	NA	coding protein	psRNATarget
XM_008671984.2	ncRNA:24   CCGAGUCCGCCGGCGGCGGGAGGC   1   ****|||||||||||||||*|||| targets:240   CCACCAGGCGGCCGCCGCCGUCCG   263 Target Full Sequence	1.5	PREDICTED: Zea mays protein GAMETE EXPRESSED 2 (LOC103647443), mRNA	NA	coding protein	psRNATarget
XM_008663329.2	ncRNA:24   CCGAGUCCGCCGGCGGCGGGAGGC   1   |||-||*||||||||||||*|||| targets:58   GGC-CAUGCGGCCGCCGCCGUCCG   80 Target Full Sequence	2.5	PREDICTED: Zea mays putative acyl-CoA N-acyltransferases (NAT) family protein (GNAT42), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008663325.2	ncRNA:24   CCGAGUCCGCCGGCGGCGGGAGGC   1   |||-||*||||||||||||*|||| targets:58   GGC-CAUGCGGCCGCCGCCGUCCG   80 Target Full Sequence	2.5	PREDICTED: Zea mays putative acyl-CoA N-acyltransferases (NAT) family protein (GNAT42), transcript variant X1, mRNA	NA	coding protein	psRNATarget