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BaseInfo

ncRNA ID novel_zma_miR2353
Species Zea mays
Class miRNA
Genome position Chr6:109767471-109767527 [+]
Reference genome RefGen_v4
Source SRR2089712
Length 22
Mature sequence(if miRNA) 36 - CUCUCUGGCUGUAGCACCGGAG - 57
Stem-loop(if miRNA) --    AUAGUCU  G       -   AC
  CCGG       GC CAGAGAG GCC  A
  ||||       || ||||||| |||  G
  GGCC       CG GUCUCUC CGG  A
GA    ACGAUGU  -       G   AC
Stem-loop sequence CCGGAUAGUCUGCGCAGAGAGGCCACAGACAGGCGCUCUCUGGCUGUAGCACCGGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT061123.2
ncRNA:22   GAGGCCACGAUGUCGGUCUCUC   1
  *|||||||||||||||||||||
targets:299   GUCCGGUGCUACAGCCAGAGAG   320

0.0 Zea mays full-length cDNA clone ZM_BFb0108I22 mRNA, complete cds NA coding protein psRNATarget
EU940845.1
ncRNA:22   GAGGCCACGAUGUCGGUCUCUC   1
  *|||||||||||||||||||||
targets:1415   GUCCGGUGCUACAGCCAGAGAG   1436

0.0 Zea mays clone 1163633 mRNA sequence NA coding protein psRNATarget
BT065201.2
ncRNA:22   GAGGCCACGAUGUCGGUCUCUC   1
  *|||||||||||||||*|||||
targets:758   GUCCGGUGCUACAGCCCGAGAG   779

1.5 Zea mays full-length cDNA clone ZM_BFb0032D05 mRNA, complete cds NA coding protein psRNATarget