ncRNA ID | novel_zma_miR2351 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:131027653-131027775 [-] |
Reference genome | RefGen_v4 |
Source | SRR1583944 |
Length | 24 |
Mature sequence(if miRNA) | 100 - AGGAUCGUUGUCACCAUAUGGUGU - 123 |
Stem-loop(if miRNA) |
--       -U G    -         UAAUUUAUUU G    UUUA       C  ----C       A   AGGAUCG  U UCAC CAUAUGGUG          A UCAU    UACAGAA UC     UAUAUAU A   |||||||  | |||| |||||||||          | ||||    ||||||| ||     ||||||| U   UCCUAGU  A AGUG GUAUACUAC          U AGUA    AUGUUUU AG     GUGUAUA A GU       UC G    U         ---------- G    --CC       U  UUACA       A |
Stem-loop sequence | AGGAUCGUUGUCACCAUAUGGUGUAAUUUAUUUAGUCAUUUUAUACAGAACUCCUAUAUAUAAUAAAUAUGUGACAUUGAUUUUUGUACCAUGAGUCAUCAUAUGUGUGAGACUUGAUCCUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008680517.2 |
|
2.5 | PREDICTED: Zea mays pentatricopeptide repeat-containing protein At5g65560 (LOC103653689), mRNA | NA | coding protein | psRNATarget |