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BaseInfo

ncRNA ID novel_zma_miR2337
Species Zea mays
Class miRNA
Genome position Chr6:109128935-109129028 [-]
Reference genome RefGen_v4
Source SRR2089712
Length 24
Mature sequence(if miRNA) 1 - UGUAAUGUCUCUGGCACUCGGCAA - 24
Stem-loop(if miRNA) --     U     AG C   A                 AAGAU    
  GCCGA UGUCA  G CAU GCACUCGGCAAAGAACC     CUGGG
  ||||| |||||  | ||| |||||||||||||||||     ||||C
  CGGCU ACGGU  C GUA UGUGAGCCGUUUCUUGG     GGCCA
AA     C     CU U   A                 -AUAU    
Stem-loop sequence GCCGAUUGUCAAGGCCAUAGCACUCGGCAAAGAACCAAGAUCUGGGCACCGGUAUAGGUUCUUUGCCGAGUGUAAUGUCUCUGGCACUCGGCAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI406639.1
ncRNA:24   AACGGCUCACGGUCUCUGUAAUGU   1
  |||||||||||||*||||||||||
targets:173   UUGCCGAGUGCCAUAGACAUUACA   196

1.5 Sequence 4764 from Patent EP2074227 NA coding protein psRNATarget
JB167100.1
ncRNA:24   AACGGCUCACGGUCUCUGUAAUGU   1
  |||||||||||||*||||||||||
targets:173   UUGCCGAGUGCCAUAGACAUUACA   196

1.5 Sequence 4764 from Patent EP2559767 NA coding protein psRNATarget
LQ238769.1
ncRNA:24   AACGGCUCACGGUCUCUGUAAUGU   1
  |||||||||||||*||||||||||
targets:173   UUGCCGAGUGCCAUAGACAUUACA   196

1.5 Sequence 4764 from Patent EP2985353 NA coding protein psRNATarget