ncRNA ID | novel_zma_miR2333 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:142991039-142991144 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089712;SRR2287161 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GGCAAAGAAUAUAGCACUCGGCAA - 24 |
Stem-loop(if miRNA) |
--          ---      UA     G     -UUG  U              A   GCCGAGUGUU   UUCUUU  CCGAG GUUUU    UG GGCACUCGGCAAAG G   ||||||||||   ||||||  ||||| |||||    || ||||||||||||||   CGGCUCACGA   AAGAAA  GGCUC CAAAA    GC CCGUGAGCCGUUUC C AA          UAU      -C     A     UAAA  -              U |
Stem-loop sequence | GCCGAGUGUUUUCUUUUACCGAGGGUUUUUUGUGUGGCACUCGGCAAAGAGCUCUUUGCCGAGUGCCCGAAAUAAAACACUCGGCAAAGAAUAUAGCACUCGGCAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT042352.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0207J05 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001148473.2 |
|
2.5 | Zea mays Protein CHLORORESPIRATORY REDUCTION 6 chloroplastic (si707021b11), mRNA | NA | coding protein | psRNATarget |