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BaseInfo

ncRNA ID novel_zma_miR2332
Species Zea mays
Class miRNA
Genome position Chr6:146930188-146930253 [-]
Reference genome RefGen_v4
Source SRR2089712;SRR2089713
Length 24
Mature sequence(if miRNA) 43 - CUCUCUGCGGAGGCGUGGACGGUC - 66
Stem-loop(if miRNA) --   U     -G   -       G     C   A
  CUC CUGCG  AGG CGUGGAC GUCCG GGC C
  ||| |||||  ||| ||||||| ||||| |||
  GAG GACGC  UCC GCACCUG CAGGC CCG A
GC   -     GG   A       G     -   G
Stem-loop sequence CUCUCUGCGGAGGCGUGGACGGUCCGCGGCACAGGCCCGGACGGUCCACGACCUGGCGCAGGAGCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT039435.1
ncRNA:24   CUGGCAGGUGCGGAGGCGUCUCUC   1
  ||||||||=|||||||||||||||
targets:305   GACCGUCCGCGCCUCCGCAGAGAG   328

1.0 Zea mays full-length cDNA clone ZM_BFc0013G13 mRNA, complete cds NA coding protein psRNATarget
NM_001349036.1
ncRNA:24   CUG-GCAGGUGCGGAGGCGUCUCUC   1
  |||-||*||||||||||||*|||||
targets:94   GACGCGCCCACGCCUCCGCUGAGAG   118

2.5 Zea mays Protein NRT1/ PTR FAMILY 5.10 (LOC100382172), mRNA NA coding protein psRNATarget