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BaseInfo

ncRNA ID osa-miR6250
Species Oryza sativa
Class miRNA
Genome position Chr6:28264615-28264740 [+]
Reference genome MSU7
Source miRBase
Length 22
Mature sequence(if miRNA) 95 - GGGGAUAGAUCGACGCGUCAAG - 116
Stem-loop(if miRNA) UGUUUUU      UU  -     A  -       CUUGU      UA      -G       AUAU
       UUUCUU  UG GUUGA UC GUCCUCU     UCUUGU  AGGUGG  GGCACCA    A
       ||||||  || ||||| || |||||||     ||||||  ||||||  |||||||    U
       AAAGAA  GC CAGCU AG UAGGGGA     AGAGCG  UCUACC  CCGUGGU    C
CUUUGCU      CU  G     -  A       -----      UC      GA       ACCA
Stem-loop sequence UGUUUUUUUUCUUUUUGGUUGAAUCGUCCUCUCUUGUUCUUGUUAAGGUGGGGGCACCAAUAUAUCACCAUGGUGCCAGCCAUCUCUGCGAGAAGGGGAUAGAUCGACGCGUCAAGAAAUCGUUUC

Reference

1 PMID:22585409
"Novel miRNAs in the control of arsenite levels in rice";
Liu Q;
Funct Integr Genomics. 12:649-658(2012).