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BaseInfo

ncRNA ID	ath-miRf10031-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - GAUACUUUGCAGCCACAAUCU - NA
Stem-loop(if miRNA)	G      ACU C                   UG    UC    UGU GC AGAACA   G UUGUGGCUGCAAAGUAUCA  UCUG  AUUG   A || ||||||   | |||||||||||||||||||  ||||  |||| CG UCUUGU   C AACACCGACGUUUCAUAGU  AGAU  UGAU   A   -      -AU U                   --    CU    UUG
Stem-loop sequence	GCGAGAACAACUGCUUGUGGCUGCAAAGUAUCAUGUCUGUCAUUGUGUAAGUUUAGUUCUAGAUGAUACUUUGCAGCCACAAUCUAUGUUCUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BX817722.1	ncRNA:21   UCUAACACCGACGUUUCAUAG   1   ||=|||||||||||||||||* targets:313   AGGUUGUGGCUGCAAAGUAUA   333 Target Full Sequence	2.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL38ZH02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
KJ139005.1	ncRNA:21   UCUAACACCGACGUUUCAUAG   1   ||=|||||||||||||||||* targets:866   AGGUUGUGGCUGCAAAGUAUA   886 Target Full Sequence	2.0	Arabidopsis thaliana glycosyltransferase (AT1G15980) mRNA, partial cds	NA	coding protein	psRNATarget
AY124875.1	ncRNA:21   UCUAACACCGACGUUUCAUAG   1   ||=|||||||||||||||||* targets:866   AGGUUGUGGCUGCAAAGUAUA   886 Target Full Sequence	2.0	Arabidopsis thaliana At1g15980/T24D18_8 mRNA, complete cds	NA	coding protein	psRNATarget
AY057703.1	ncRNA:21   UCUAACACCGACGUUUCAUAG   1   ||=|||||||||||||||||* targets:882   AGGUUGUGGCUGCAAAGUAUA   902 Target Full Sequence	2.0	Arabidopsis thaliana At1g15980/T24D18_8 mRNA, complete cds	NA	coding protein	psRNATarget
AY084966.1	ncRNA:21   UCUAACACCGACGUUUCAUAG   1   ||=|||||||||||||||||* targets:882   AGGUUGUGGCUGCAAAGUAUA   902 Target Full Sequence	2.0	Arabidopsis thaliana clone 122986 mRNA, complete sequence	NA	coding protein	psRNATarget
NM_101466.3	ncRNA:21   UCUAACACCGACGUUUCAUAG   1   ||=|||||||||||||||||* targets:1035   AGGUUGUGGCUGCAAAGUAUA   1055 Target Full Sequence	2.0	Arabidopsis thaliana NDH-dependent cyclic electron flow 1 (PnsB1), mRNA	NDH-dependent cyclic electron flow 1(PnsB1)	coding protein	psRNATarget
BT008695.1	ncRNA:21   UCUAACACCGACGUUUCAUAG   1   *||||||*|||||*||||||| targets:341   UGAUUGUUGCUGCUAAGUAUC   361 Target Full Sequence	2.5	Arabidopsis thaliana clone RAFL09-94-F23 (R19927) unknown protein (At3g29400) mRNA, complete cds	NA	coding protein	psRNATarget
NM_113866.3	ncRNA:21   UCUAACACCGACGUUUCAUAG   1   *||||||*|||||*||||||| targets:415   UGAUUGUUGCUGCUAAGUAUC   435 Target Full Sequence	2.5	Arabidopsis thaliana exocyst subunit exo70 family protein E1 (EXO70E1), mRNA	exocyst subunit exo70 family protein E1(EXO70E1)	coding protein	psRNATarget
BX813942.1	ncRNA:21   UCUAACACCGACGUUUCAUAG   1   |||||*|*||||||||||||* targets:1372   AGAUUCUUGCUGCAAAGUAUG   1392 Target Full Sequence	3.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB49ZC05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AK317003.1	ncRNA:21   UCUAACACCGACGUUUCAUAG   1   |||||*|*||||||||||||* targets:1453   AGAUUCUUGCUGCAAAGUAUG   1473 Target Full Sequence	3.0	Arabidopsis thaliana AT1G30820 mRNA, complete cds, clone: RAFL19-54-E04	NA	coding protein	psRNATarget
AK316955.1	ncRNA:21   UCUAACACCGACGUUUCAUAG   1   |||||*|*||||||||||||* targets:1383   AGAUUCUUGCUGCAAAGUAUG   1403 Target Full Sequence	3.0	Arabidopsis thaliana AT1G30820 mRNA, partial sequence, clone: RAFL14-28-F08	NA	coding protein	psRNATarget
NM_102819.4	ncRNA:21   UCUAACACCGACGUUUCAUAG   1   |||||*|*||||||||||||* targets:1502   AGAUUCUUGCUGCAAAGUAUG   1522 Target Full Sequence	3.0	Arabidopsis thaliana CTP synthase family protein mRNA	CTP synthase family protein(AT1G30820)	coding protein	psRNATarget