Search result

BaseInfo

ncRNA ID	novel_zma_miR2328
Species	Zea mays
Class	miRNA
Genome position	Chr6:170549800-170549867 [-]
Reference genome	RefGen_v4
Source	SRR2089712
Length	24
Mature sequence(if miRNA)	45 - UCGUUUUUUUAGUUGUCGCUGGAU - 68
Stem-loop(if miRNA)	--       --                    U  A   UCGUUUU  UUUAGUUGUCGCUGGAUAGU CA U   |||||||  |||||||||||||||||||| ||   GGCAAAG  AAAUCAACAGCGACCUAUCA GU U GA       CA                    C  U
Stem-loop sequence	UCGUUUUUUUAGUUGUCGCUGGAUAGUUCAAUUUUGCACUAUCCAGCGACAACUAAAACGAAACGGAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ239399.1	ncRNA:24   UAGGUCGCUGUUGAUUUUUUUGCU   1   |||||||||||||||||||||||= targets:56   AUCCAGCGACAACUAAAAAAACGG   79 Target Full Sequence	1.0	Sequence 5394 from Patent EP2985353	NA	coding protein	psRNATarget
HI407269.1	ncRNA:24   UAGGUCGCUGUUGAUUUUUUUGCU   1   |||||||||||||||||||||||= targets:56   AUCCAGCGACAACUAAAAAAACGG   79 Target Full Sequence	1.0	Sequence 5394 from Patent EP2074227	NA	coding protein	psRNATarget
JB167730.1	ncRNA:24   UAGGUCGCUGUUGAUUUUUUUGCU   1   |||||||||||||||||||||||= targets:56   AUCCAGCGACAACUAAAAAAACGG   79 Target Full Sequence	1.0	Sequence 5394 from Patent EP2559767	NA	coding protein	psRNATarget
XM_020549872.1	ncRNA:24   UAGGUCGCUGUUGAUUUUUUUGCU   1   |||||||||||||||||||||||= targets:1315   AUCCAGCGACAACUAAAAAAACGG   1338 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC100382893 (LOC100382893), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001175582.1	ncRNA:24   UAGGUCGCUGUUGAUUUUUUUGCU   1   |||||||||||||||||||||||= targets:1482   AUCCAGCGACAACUAAAAAAACGG   1505 Target Full Sequence	1.0	Zea mays uncharacterized LOC100382893 (LOC100382893), mRNA	NA	coding protein	psRNATarget
BT065656.1	ncRNA:24   UAGGUCGCUGUUGAUUUUUUUGCU   1   |||||||||||||||||||||||= targets:1482   AUCCAGCGACAACUAAAAAAACGG   1505 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0005B18 mRNA, complete cds	NA	coding protein	psRNATarget