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BaseInfo

ncRNA ID novel_zma_miR2327
Species Zea mays
Class miRNA
Genome position Chr6:171571100-171571182 [-]
Reference genome RefGen_v4
Source SRR2089712
Length 21
Mature sequence(if miRNA) 1 - UAGCUCUUCCUGUUUGGAUAU - 21
Stem-loop(if miRNA) --              CA      C      UAG     AA
  AUCCAAAUAGGAAG  CUAAAA UGAUUA   UGGUG  A
  ||||||||||||||  |||||| ||||||   |||||  A
  UAGGUUUGUCCUUC  GAUUUU ACUGAU   ACUAU  A
UA              UC      C      UUA     GA
Stem-loop sequence AUCCAAAUAGGAAGCACUAAAACUGAUUAUAGUGGUGAAAAAAGUAUCAAUUUAGUCACUUUUAGCUCUUCCUGUUUGGAUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT037012.1
ncRNA:21   UAUAGGUUUGUCCUUCUCGAU   1
  |*|||||||||||||||||||
targets:88   AAAUCCAAACAGGAAGAGCUA   108

0.0 Zea mays full-length cDNA clone ZM_BFb0151I24 mRNA, complete cds NA coding protein psRNATarget
BT066106.2
ncRNA:21   UAUAGGUUUGUCCUUCUCGAU   1
  |*||||*||||||||||||||
targets:875   AGAUCCCAACAGGAAGAGCUA   895

1.0 Zea mays full-length cDNA clone ZM_BFb0327N02 mRNA, complete cds NA coding protein psRNATarget