ncRNA ID | novel_zma_miR2326 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:166177969-166178131 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089712 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGCAUCUCAAGUUGGACCAAAAU - 24 |
Stem-loop(if miRNA) |
--              G             -UAAUAAA    UAAC          A  ----------         UAU   AUUUU   AAGCAUCUCAAGUU GACCAAAAUUAUA        ACAA    AUUUAUGAUA CA          UAUAAAUAU   UAG     U   |||||||||||||| |||||||||||||        ||||    |||||||||| ||          |||||||||   |||   UUCGUAGAGUUCAA CUGGUUUUAAUAU        UGUU    UAAAUACUGU GU          AUAUUUAUA   AUC     C GU              A             CUCUCUUA    --UC          A  UUAUCCGUAU         --U   AAUUA |
Stem-loop sequence | AAGCAUCUCAAGUUGGACCAAAAUUAUAUAAUAAAACAAUAACAUUUAUGAUAACAUAUAAAUAUUAUUAGAUUUUUCAUUAACUAUAUAUUUAUAUAUGCCUAUUUGAUGUCAUAAAUCUUUGUAUUCUCUCUAUAAUUUUGGUCAAACUUGAGAUGCUUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020540356.1 |
|
2.0 | PREDICTED: Zea mays Salt tolerance-like protein (Orphan191), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
EU941794.1 |
|
2.0 | Zea mays clone 1470136 mRNA sequence | NA | coding protein | psRNATarget |