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BaseInfo

ncRNA ID	novel_zma_miR2325
Species	Zea mays
Class	miRNA
Genome position	Chr6:165981197-165981334 [+]
Reference genome	RefGen_v4
Source	SRR2089712
Length	25
Mature sequence(if miRNA)	1 - AGAAAAGAAGUGGAGAGUGGCUGGU - 25
Stem-loop(if miRNA)	--A  A     G G     UG      ACA  CAAAG     UUC GG    G         --        G    GA AAGAA U GAGAG  GCUGGU   GC     GCUGC   G  CUGG GCACCGGAC  UGUCCGGU U    || ||||| | |||||  ||||||   ||     |||||   |  |||| |||||||||  ||||||||    CU UUUUU G CUCUC  CGACCA   CG     CGACG   C  GACC CGUGGCCUG  ACAGGCCA G GGC  C     G G     GU      -AA  -----     CGA UA    G         UG        C
Stem-loop sequence	AGAAAAGAAGUGGAGAGUGGCUGGUACAGCCAAAGGCUGCUUCGGGCUGGGGCACCGGACUGUCCGGUGUGCACCGGACAGUGUCCGGUGCGCCAGAUCAGCGCAGCGCAAACCAGCUGCUCUCGGGUUUUUCUCCGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001165868.1	ncRNA:25   UG-GUCGGUGAGAGGUGAAGAAAAGA   1   ||-|||||||||||||||||*||||| targets:890   ACACAGCCACUCUCCACUUCCUUUCU   915 Target Full Sequence	1.5	Zea mays uncharacterized LOC100304434 (LOC100304434), mRNA	NA	coding protein	psRNATarget
BT061141.2	ncRNA:25   UG-GUCGGUGAGAGGUGAAGAAAAGA   1   ||-|||||||||||||||||*||||| targets:890   ACACAGCCACUCUCCACUUCCUUUCU   915 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0115B09 mRNA, complete cds	NA	coding protein	psRNATarget
EU945056.1	ncRNA:25   UGGUCGGUGAGAGGUGAAGAAAAGA   1   ==|-|=|=|||||||||*||||||| targets:767   GUC-GUCGCUCUCCACUCCUUUUCU   790 Target Full Sequence	2.5	Zea mays clone 239495 mRNA sequence	NA	coding protein	psRNATarget
XM_020539608.1	ncRNA:25   UGGUCGGUGAGAGGUGAAGAAAAGA   1   *===*|||*|||||||||=|||||| targets:190   UUUGUCCAGUCUCCACUUUUUUUCU   214 Target Full Sequence	2.5	PREDICTED: Zea mays serine/arginine repetitive matrix protein 1-like (LOC109940230), mRNA	NA	coding protein	psRNATarget