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BaseInfo

ncRNA ID novel_zma_miR2314
Species Zea mays
Class miRNA
Genome position Chr4:147116384-147116457 [-]
Reference genome RefGen_v4
Source SRR1583944
Length 24
Mature sequence(if miRNA) 51 - AUCUAAUUAUGGGUCGUGCCGUGC - 74
Stem-loop(if miRNA) --AU      A              CCA  A  -  UGC
    CUAAUU UGGGUCGUGCCGUG   GC CG UG   C
    |||||| ||||||||||||||   || || ||
    GAUUAA ACCCGGCACGGCAC   CG GC AC   C
UAUU      C              --C  -  U  UGA
Stem-loop sequence AUCUAAUUAUGGGUCGUGCCGUGCCAGCACGUGUGCCCAGUCAUCGGCCCACGGCACGGCCCACAAUUAGUUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020547541.1
ncRNA:24   CGUGCCGUGCUGGGUAUUAAUCUA   1
  ||||||||||=|||||||||||||
targets:3390   GCACGGCACGGCCCAUAAUUAGAU   3413

1.0 PREDICTED: Zea mays uncharacterized LOC100273682 (LOC100273682), transcript variant X1, mRNA NA coding protein psRNATarget