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BaseInfo

ncRNA ID novel_zma_miR2312
Species Zea mays
Class miRNA
Genome position Chr5:88292621-88292714 [+]
Reference genome RefGen_v4
Source SRR2089712
Length 24
Mature sequence(if miRNA) 71 - UGUAAUGUCUCUGGCACUCGGCAA - 94
Stem-loop(if miRNA) --           -    C  A                 AAG   U G
  GCCGAGUGUCA AGAC AU GCACUCGGCAAAGAACC   ACC G G
  ||||||||||| |||| || |||||||||||||||||   ||| |
  CGGCUCACGGU UCUG UA UGUGAGCCGUUUCUUGG   UGG C C
AA           C    -  A                 AUA   C A
Stem-loop sequence GCCGAGUGUCAAGACCAUAGCACUCGGCAAAGAACCAAGACCUGGGCACCGGUAUAGGUUCUUUGCCGAGUGUAAUGUCUCUGGCACUCGGCAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB167100.1
ncRNA:24   AACGGCUCACGGUCUCUGUAAUGU   1
  |||||||||||||*||||||||||
targets:173   UUGCCGAGUGCCAUAGACAUUACA   196

1.5 Sequence 4764 from Patent EP2559767 NA coding protein psRNATarget
LQ238769.1
ncRNA:24   AACGGCUCACGGUCUCUGUAAUGU   1
  |||||||||||||*||||||||||
targets:173   UUGCCGAGUGCCAUAGACAUUACA   196

1.5 Sequence 4764 from Patent EP2985353 NA coding protein psRNATarget
HI406639.1
ncRNA:24   AACGGCUCACGGUCUCUGUAAUGU   1
  |||||||||||||*||||||||||
targets:173   UUGCCGAGUGCCAUAGACAUUACA   196

1.5 Sequence 4764 from Patent EP2074227 NA coding protein psRNATarget