ncRNA ID | osa-miR160b-3p |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr6:28081020-28081158 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 93 - GCGUGCAAGGAGCCAAGCAUG - 113 |
Stem-loop(if miRNA) |
     --UU  UUUU    --   UUGAGA      C       C              GU   CCA     UGG AAGGU    GG    GAUC  GGC      GCGUGC UGGCUCC UGUAUGCCACUCAU  AGC   AUCCA   U |||||    ||    ||||  |||      |||||| ||||||| ||||||||||||||  |||   |||||   G UUCCG    UC    CUAG  CCG      CGUACG ACCGAGG ACGUGCGGUGGGUG  UCG   UAGGU   U      UCUU  -UCU    UA   ----UG      A       A              --   ---     UUG |
Stem-loop sequence | AAGGUUUGGUUUUGAUCGGCUUGAGAGCGUGCCUGGCUCCCUGUAUGCCACUCAUGUAGCCCAAUCCAUGGUGUGUUUGGAUGCUGUGGGUGGCGUGCAAGGAGCCAAGCAUGCGUGCCAUGAUCUCUCUUUCUGCCUU |
1 | PMID:12101121
"MicroRNAs in plants"; Reinhart BJ, Weinstein EG, Rhoades MW, Bartel B, Bartel DP; Genes Dev. 16:1616-1626(2002). |
2 | PMID:21901091
"Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors"; Du P, Wu J, Zhang J, Zhao S, Zheng H, Gao G, Wei L, Li Y; PLoS Pathog. 7:e1002176(2011). |