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BaseInfo

ncRNA ID osa-miR160b-3p
Species Oryza sativa
Class miRNA
Genome position Chr6:28081020-28081158 [+]
Reference genome MSU7
Source miRBase
Length 21
Mature sequence(if miRNA) 93 - GCGUGCAAGGAGCCAAGCAUG - 113
Stem-loop(if miRNA)      --UU  UUUU    --   UUGAGA      C       C              GU   CCA     UGG
AAGGU    GG    GAUC  GGC      GCGUGC UGGCUCC UGUAUGCCACUCAU  AGC   AUCCA   U
|||||    ||    ||||  |||      |||||| ||||||| ||||||||||||||  |||   |||||   G
UUCCG    UC    CUAG  CCG      CGUACG ACCGAGG ACGUGCGGUGGGUG  UCG   UAGGU   U
     UCUU  -UCU    UA   ----UG      A       A              --   ---     UUG
Stem-loop sequence AAGGUUUGGUUUUGAUCGGCUUGAGAGCGUGCCUGGCUCCCUGUAUGCCACUCAUGUAGCCCAAUCCAUGGUGUGUUUGGAUGCUGUGGGUGGCGUGCAAGGAGCCAAGCAUGCGUGCCAUGAUCUCUCUUUCUGCCUU

Reference

1 PMID:12101121
"MicroRNAs in plants";
Reinhart BJ, Weinstein EG, Rhoades MW, Bartel B, Bartel DP;
Genes Dev. 16:1616-1626(2002).
2 PMID:21901091
"Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors";
Du P, Wu J, Zhang J, Zhao S, Zheng H, Gao G, Wei L, Li Y;
PLoS Pathog. 7:e1002176(2011).