ncRNA ID | novel_zma_miR2302 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:43379887-43380008 [-] |
Reference genome | RefGen_v4 |
Source | SRR1583941 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUUUUAAAUCUGGAACGUCCAUCC - 24 |
Stem-loop(if miRNA) |
--                                                     CG  AA   AUGGACGUUUCAGAUUUAAAAUGUGCACGUGAGCACCGUACCCUUUUGAGCAC  GG  C   |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||   UACCUGCAAGGUCUAAAUUUUAUACGUGCACUCGUGGCAUGGGGAAACUCGUG  CU  A CC                                                     AU  AU |
Stem-loop sequence | AUGGACGUUUCAGAUUUAAAAUGUGCACGUGAGCACCGUACCCUUUUGAGCACCGGGAACAUAUCUAGUGCUCAAAGGGGUACGGUGCUCACGUGCAUAUUUUAAAUCUGGAACGUCCAUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008661793.2 |
|
2.5 | PREDICTED: Zea mays uncharacterized LOC103639018 (LOC103639018), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008661794.2 |
|
2.5 | PREDICTED: Zea mays uncharacterized LOC103639018 (LOC103639018), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020537973.1 |
|
1.0 | PREDICTED: Zea mays mitochondrial import inner membrane translocase subunit TIM22-4-like (LOC109939669), mRNA | NA | coding protein | psRNATarget |