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BaseInfo

ncRNA ID	novel_zma_miR2297
Species	Zea mays
Class	miRNA
Genome position	Chr10:64556189-64556338 [+]
Reference genome	RefGen_v4
Source	SRR2089712;SRR2089701;SRR2089703
Length	24
Mature sequence(if miRNA)	127 - CACAAAGAGAGUGGGAGAGCAGGC - 150
Stem-loop(if miRNA)	--      -   U C        U  G    U  AUAC  A  A     --AG   G  --------   GUUCUUCUGGUUA   CUGUUC CCC C CUCUUUGU GC UGUA AA    GG GG GACGG    GAG UG        CAG             C   |||||| ||| | |||||||| || |||| ||    || || |||||    ||| ||        |||             A   GACGAG GGG G GAGAAACA CG GCGU UU    CC CC CUGCC    CUC AC        CGC             C CG      A   U A        -  A    C  ----  A  -     CUUA   G  UUACUUUA   AAACUCUCAAGCG
Stem-loop sequence	CUGUUCCCCUCCCUCUUUGUUGCGUGUAUAAAUACGGAGGAGACGGAGGAGGUGCAGGUUCUUCUGGUUACACGCGAACUCUCAAACGCAUUUCAUUCAGCUCAUUCCCGUCCCACCUUCUGCGAGCACAAAGAGAGUGGGAGAGCAGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT087914.1	ncRNA:24   CG-GACGAGAGGGUGAGAGAAACAC   1   ||-||*|*|||||||||*||||||| targets:72   GCGCUCCCCUCCCACUCGCUUUGUG   96 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0307A15 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001150737.1	ncRNA:24   CG-GACGAGAGGGUGAGAGAAACAC   1   ||-||*|*|||||||||*||||||| targets:26   GCGCUCCCCUCCCACUCGCUUUGUG   50 Target Full Sequence	2.5	Zea mays uncharacterized LOC100277070 (LOC100277070), mRNA	NA	coding protein	psRNATarget
EU966578.1	ncRNA:24   CG-GACGAGAGGGUGAGAGAAACAC   1   ||-||*|*|||||||||*||||||| targets:26   GCGCUCCCCUCCCACUCGCUUUGUG   50 Target Full Sequence	2.5	Zea mays clone 295411 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget